Sinorhizobium chiapasense: RB548_12525
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Entry
RB548_12525 CDS
T11111
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
schp Sinorhizobium chiapasense
Pathway
schp00470
D-Amino acid metabolism
schp00550
Peptidoglycan biosynthesis
schp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
schp00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RB548_12525 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RB548_12525 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
schp01011
]
RB548_12525 (murD)
Enzymes [BR:
schp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
RB548_12525 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
schp01011
]
Precursor biosynthesis
Amino acid ligase
RB548_12525 (murD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
KARI_N
NAD_binding_2
TrkA_N
F420_oxidored
ADH_zinc_N
NAD_Gly3P_dh_N
Motif
Other DBs
NCBI-ProteinID:
WVT02350
UniProt:
A0ABZ2B864
LinkDB
All DBs
Position
complement(2573192..2574583)
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AA seq
463 aa
AA seq
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MIPVTTFKDKKVALFGLGGSGLATAQALVAGGAEVVAWDDNPDSVAKAAAAGISTADLRG
VDWSAFATFVLSPGVPLTHPKPHWTVDLAHQAGVEIIGDVELFVRERRVHAPDCPFIAIT
GTNGKSTTTALIAHILKETGRDTQLGGNIGTAVLTLDPPKAGRFYVVECSSYQIDLAPTL
ESTAGVLLNLTPDHLDRHGTMQHYANIKERLVAGSGTAIVGVDDSFSSLIADRVERAGTR
VVRISRRQVLADGFYAEGSQLMRASGGTSSLFTDLDGVQTLRGGHNAQNAAAAIAACLAV
GVDEKDIVDGLRSFPGLKHRMQPVGQKGDVVFVNDSKATNADAAAPALSSYDRIYWIAGG
LPKEGGISSLAPFFPKIVKAYLIGEAAPAFAATLGEAVPYEISGTLEKAVARAAADAAKD
EDGPSAVMLSPACASFDQYKNFEVRGDAFVGHVAALEGVTMLV
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgatcccggtcaccacattcaaggataagaaggtcgcactcttcgggctcggcggttcc
ggcctcgcgacggcgcaagcgctggtcgccggcggggcggaggtcgtcgcctgggacgac
aatcccgacagcgtcgccaaggctgcggcagcggggatttcgacggccgacctgcgtggc
gtcgactggtctgcctttgccaccttcgtgctttctccaggcgtgccgctgacgcatccg
aagccgcattggacggtcgatctggcccaccaggccggcgtcgagatcatcggcgatgtg
gaactcttcgtgcgtgagcgccgggtgcatgcccccgattgcccgttcatcgccatcacc
ggcaccaacggcaaatcgacgaccacggcactgatcgcccatatcctcaaagaaaccggg
cgcgacacccagcttggcggcaatatcggcaccgcggtgctgacgctcgatccgccgaag
gccgggcgtttctacgtggtggaatgctcctcctatcagatcgatcttgcaccgacgctt
gagtccacggccggagtgctgcttaacctcacccccgaccatttggaccggcacggcacg
atgcagcactatgccaatatcaaggagcggctggtggccggaagcggcacggcgatcgtc
ggcgtggatgacagcttctcgagcctgatcgccgaccgcgtggagcgcgccggaacgagg
gtcgtgcgcatttcgcgccggcaagtgcttgccgacgggttttatgccgagggctcgcag
ctgatgcgcgccagcggcggcacgtcttcgctgttcaccgatcttgacggggtccagacg
ctgcgcggtgggcataacgcccagaatgcggcggcagcgattgcagcctgtcttgcggtt
ggcgtcgacgaaaaggacatcgtcgatgggcttcgcagcttcccgggtctcaagcaccgg
atgcagccggtcgggcagaagggcgacgttgtcttcgtcaacgacagcaaggcgaccaat
gcggacgccgcggcgccggcgctgtcgagctacgatcggatctactggattgccggcggt
ctgccgaaggagggcggcatctcgtcgcttgcgccgttcttcccgaagatcgtcaaggcc
tatctgatcggcgaggccgcaccggcctttgcggcgacgctcggcgaggccgtgccctac
gagatttccggaacgctggagaaggcggtcgcccgtgcggcggcggatgcggcaaaagac
gaggacgggccttcggccgtgatgctctccccggcttgcgcaagcttcgaccagtacaag
aatttcgaggtgcgtggagatgcctttgtcgggcacgtggcggcactcgaaggcgtgacc
atgctcgtctga
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