Sinorhizobium chiapasense: RB548_12925
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Entry
RB548_12925 CDS
T11111
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
schp Sinorhizobium chiapasense
Pathway
schp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
schp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RB548_12925
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
schp02000
]
RB548_12925
Transporters [BR:
schp02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
RB548_12925
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Phosphonate-bd
Ral
Motif
Other DBs
NCBI-ProteinID:
WVT02421
UniProt:
A0ABZ2B505
LinkDB
All DBs
Position
2671251..2672411
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AA seq
386 aa
AA seq
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MKQILKSCTALTLSLGLVAPALAQEPLKELGKGEGELSIVAWAGYIERGETDKNYDWVTD
FEKETGCKVSVKTAATSDEMVALMNEGGFDLVTASGDASLRLVAGKRVQPINTDLIPSWK
TIDERMQSAPWHTVNGVHYGTPYVWGPNVLMYNKDAFKGEAPKSWNVVFEEMTLPDGKSN
KGRVQAYDGPIHVADAANYLMAHKPDLGIKNPYELNEDQYKAALDLLRTQRTLVGRYWHD
AMIQIDDFKNEGVVASGSWPFQVNLMEAEKLPIASVIPEEGVTGWADTTMLHAESAHPNC
AYMWMEHSLSPKVQGDVSAWFGANPSVGAACKGNELLTDAGCKTNGYEDFDKVKFWKTPV
TKCESQGECVPYHRWVSDYIGVIGGR
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagatcttgaaatcctgcacggcgcttactctttcgctgggcctcgtcgcccct
gcgctcgcgcaggagccgctgaaggagttgggcaagggcgaaggggagctgtcgatcgtc
gcctgggccggttacatcgagcgcggcgaaaccgacaagaactacgattgggttaccgac
ttcgagaaagagacgggctgcaaggtcagcgtcaagaccgcagccacctcggatgaaatg
gtcgcgctgatgaacgaaggcggctttgacctcgtcactgcctctggtgatgcctccctg
cgcctcgtcgccggcaagcgcgtccagccgatcaacaccgacctcatcccgagctggaag
acgatcgacgagcgcatgcagagtgcgccgtggcacacggtcaacggcgtccactacggc
accccctatgtctggggcccgaacgtgctgatgtacaacaaggacgccttcaagggcgaa
gcgccgaagagctggaacgtcgtcttcgaggaaatgacgctgccggacggcaagtccaac
aagggccgcgtccaggcctatgacggcccgatccacgtcgccgacgccgccaactacctg
atggcgcacaagcccgatctcggcatcaagaatccttacgagctcaacgaggatcaatac
aaagccgcactcgacctgcttcgcactcagcgcactctcgtcggccgctattggcacgac
gcgatgatccagatcgacgacttcaagaacgaaggcgtcgttgcctccggctcctggccg
ttccaggtcaacctgatggaggccgaaaagctgccgatcgcctcggtcatcccggaggaa
ggggtaacgggctgggccgatacgaccatgctgcacgccgaaagcgcgcacccgaactgc
gcctacatgtggatggagcactcgctctcgccgaaggtgcagggtgacgtttccgcctgg
ttcggcgcaaacccctctgtcggcgcagcctgcaagggcaatgagctcctgaccgacgcc
ggctgcaagaccaacggctacgaggacttcgacaaggtcaagttctggaagacgccggtg
acgaagtgtgaaagccagggcgaatgcgtgccctaccaccgctgggtttccgactatatc
ggcgtgatcggcgggcggtaa
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