Sinorhizobium chiapasense: RB548_14050
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Entry
RB548_14050 CDS
T11111
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
schp Sinorhizobium chiapasense
Pathway
schp00521
Streptomycin biosynthesis
schp00523
Polyketide sugar unit biosynthesis
schp00541
Biosynthesis of various nucleotide sugars
schp01100
Metabolic pathways
schp01110
Biosynthesis of secondary metabolites
schp01250
Biosynthesis of nucleotide sugars
Module
schp_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
schp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RB548_14050 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
RB548_14050 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
RB548_14050 (rfbC)
Enzymes [BR:
schp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
RB548_14050 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
WVT02630
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All DBs
Position
complement(2907687..2908220)
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AA seq
177 aa
AA seq
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MSRFKRFHTELPGLTVVERKQFGDARGFFSRFFCQEELFELGSFASIAQINHSMTRTKGA
VRGLHFQRPPYEEAKFVSCLAGAVFDVAVDMRPDSPTYLRWHGEVLSAENARSMMIPGGF
AHGFQTLTENCELIYLHDKPFAPEAEGGLNALDPRVNIAWPIEITQMSERDRNLAFV
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgcttcaagcgcttccatacggaacttcccggcctgacggtggtcgagcgcaag
caattcggtgacgcgcgtggtttcttctcgcgtttcttttgccaggaggagcttttcgag
cttggttctttcgcgtcgattgcccaaatcaatcactcgatgacgcgcaccaagggcgcc
gtccgcgggctgcatttccagcggcctccctatgaggaggcgaagttcgtctcgtgtctg
gccggtgcggttttcgacgttgctgtcgacatgcggccggattcgccaacctatttgcgt
tggcacggcgaggttctgagcgccgagaacgcgcggtccatgatgatcccgggcggcttt
gcccacggcttccagaccctcaccgagaattgcgagctgatctatcttcacgacaagccc
tttgcgccggaggcggaaggtggactgaatgcgcttgatccgcgcgtgaatatcgcatgg
ccgatcgaaattacccagatgtccgagcgcgaccgcaacctcgctttcgtctga
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