Sinorhizobium chiapasense: RB548_16135
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Entry
RB548_16135 CDS
T11111
Symbol
odc2
Name
(GenBank) ornithine/lysine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
schp Sinorhizobium chiapasense
Pathway
schp00330
Arginine and proline metabolism
schp00480
Glutathione metabolism
schp01100
Metabolic pathways
schp01110
Biosynthesis of secondary metabolites
schp04148
Efferocytosis
Module
schp_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
schp00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
RB548_16135 (odc2)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
RB548_16135 (odc2)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
RB548_16135 (odc2)
Enzymes [BR:
schp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
RB548_16135 (odc2)
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Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF8057
HyfR_N
Motif
Other DBs
NCBI-ProteinID:
WVT03013
UniProt:
A0ABZ2B7H1
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All DBs
Position
complement(3355813..3356946)
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AA seq
377 aa
AA seq
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MTTARIIDFLNTRRPEGPCLVVDLDVVRDNFRAFRHALPDSSIYYAVKANPAPEILRLLA
GLGSNFDCASVAEIEMALDAGATAQRISFGNTIKKERDIARAYALGVSLFAVDSHEEVEK
VARAAPGARVFCRVLTDGEGAEWPLSRKFGCVPQMAVDVLVYAHQLGLVSYGVSFHVGSQ
MTKLDAWDSALADAKRVFVQLAKQGIELKMVNMGGGFPTKYLRDVPSAEAYGQAIFGALK
KHFGNNIPETIIEPGRGMVGNAGVIKAEVVLVSKKSDNDNHRWVFLDIGKFGGLAETMDE
AIRYPIRTARDGDAMEPCVLAGPTCDSADVLYEKNMYPLPISLTIGDEVLIEGTGAYTTT
YSAVAFNGFEPLKAYVI
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaccactgcacgcatcatcgacttcctgaacacccgacgacccgaaggcccgtgcctc
gttgtcgacctcgacgtcgtgcgcgacaatttcagggccttccgccacgcgctgcccgac
agctcgatctattatgccgtcaaggccaacccggcgccggaaatcctgcgccttctcgcc
ggtctcggttccaacttcgattgcgcgtccgtcgccgaaatcgaaatggcgcttgatgcc
ggtgcgaccgcccaacgcatttcttttggcaacaccatcaagaaggagcgcgatattgcc
cgtgcttatgcgctgggcgtgtcccttttcgcggtcgacagccatgaggaagtcgagaag
gtcgcgcgtgccgctcccggcgcccgcgtcttctgccgcgtcctgacggatggcgaaggc
gcggaatggccgctgtcgcgcaagttcggctgcgtaccgcagatggcggtcgacgtgctc
gtctacgcgcatcagctcggcctcgtctcctacggcgtgtcgttccacgtcggctcgcag
atgacgaagctcgatgcctgggattcggcacttgccgatgccaagcgcgtcttcgtgcag
ctcgccaagcagggcatcgagctcaagatggtcaacatgggcggtggcttcccgacaaag
tacctgagggacgttccgtcggcggaagcttacggccaggcgatcttcggggcgctgaag
aagcacttcggcaacaacatcccggagacgatcatcgagccgggtcgcggcatggtcggc
aatgcgggcgtgatcaaggcggaagtcgtgctcgtctcgaagaagtcggacaacgacaac
caccgctgggtcttcctcgacatcggcaagttcggcggtctcgccgaaacgatggacgag
gcgatccgctacccgatccgcaccgcgcgtgacggcgatgcgatggagccctgcgtgctt
gccggcccgacctgcgactcggccgacgtgctctacgagaagaacatgtatccgctgccg
atctcgctgacgatcggcgacgaggttctgatcgaaggcacgggcgcctacacgacgacc
tactcggccgtcgcctttaacggcttcgagccgctgaaggcctatgtgatctga
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