Sinorhizobium chiapasense: RB548_18885
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Entry
RB548_18885 CDS
T11111
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
schp Sinorhizobium chiapasense
Pathway
schp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
schp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RB548_18885
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
schp02000
]
RB548_18885
Transporters [BR:
schp02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RB548_18885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
DUF7243
Motif
Other DBs
NCBI-ProteinID:
WVT03519
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All DBs
Position
3978743..3980347
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AA seq
534 aa
AA seq
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MAIGLTRRRILVAGMTHAAFVSIAGTFAIAPSAKADEQIESITWALPSIPETLFIPHAWM
TYAGAIMSLVQEGPLAIGDDLALQPASADRWEEVNPTTVKYHLRGGVKFGDGSPLTVDDI
VATFKYHMSPDSGSQLASFYNSVATVEATAPDEVTVKLKAPNVQFAFTPAHMAGFVFKKE
QLADKKIGTPEVLPLGTGPYKLVEFVPADRVVLEARDDYWGAKPVVKRITFQAIPDRSAR
LLAMQQGEIDGTFDLAISDIDQWKALGNVDVVATPSLGVYLLTLDHSAPPFDDIHVRRAV
AYSVDRKGLVAALLKGNGEAATALNPPEIWSGVLPLDEVRAFYATLMPNYAFDLKKAKAE
LAQSSHPDGFDVTIPASTADPYMVNIMQSVTENLKQIGIRAHIQEIDNNTWFTNYINHDK
LGMQIMAYYPDFAHAANYPSLFFSSANAKKDGMNGSNFNNPEVDAKLEIANENADPNARA
DALKKVFKIANEEVAVVPIFWPASAMAINNKYKLTGYTAFWYNIPWAVRGFGLK
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcgggttgacacggcgtcgcattttagtcgctggaatgacgcatgccgccttc
gtctccatcgcgggaaccttcgcgatagcgccttcggcaaaggcagacgagcagattgaa
tcgatcacgtgggcgctgcctagcatccccgaaacgcttttcattccgcatgcttggatg
acctacgctggcgcgatcatgtcgcttgtccaggaaggaccgctggccatcggcgacgat
ctcgctcttcagcccgcatcggccgacagatgggaggaggttaatccgacgacggtcaaa
tatcacttgcgaggcggcgtcaaattcggcgacggaagtccgctcaccgttgacgatatt
gtcgccacgttcaagtatcacatgagcccggattccggctcacagcttgcttcgttctac
aattcggtggcgacggtcgaggcgacggctcccgatgaggtgaccgtcaaattgaaggca
ccgaacgtgcagttcgcctttacgcccgcccatatggcgggtttcgtgttcaagaaggaa
cagctcgcagacaagaagatcggaacgcccgaggttctcccacttgggaccggcccctac
aagcttgttgaattcgttccggcagatcgtgtcgtcctcgaggctcgcgacgactactgg
ggagcgaagccagtcgttaaacggatcaccttccaggcgatcccagatcgctcggctcgg
cttctcgccatgcagcaaggcgagatcgacggtaccttcgatctcgccatctccgacatc
gaccagtggaaggcgctaggtaacgtcgacgtcgtcgccacgccgtcgctcggcgtatac
ttgctgactctggaccattcggcgccgccgttcgacgatatccatgtgcgccgtgcagtt
gcctattcggtggatcggaaaggcctggtcgcagcccttctcaagggtaacggcgaggca
gcgacggcattgaacccgcccgaaatctggtcgggagtgctgcctcttgacgaggttcgc
gccttctacgctacgttgatgccgaactatgcgttcgacttgaaaaaggcgaaggccgag
cttgcgcaatccagccatcctgacggctttgacgtcaccattccagcgtcgactgccgat
ccttacatggtcaacatcatgcagtcagtgacggagaatctaaagcagataggtatccgc
gcacacatacaggagatcgacaacaacacctggttcacgaactacatcaaccacgacaaa
ctaggcatgcagatcatggcgtactatccggacttcgcccacgcggccaactatccctcc
ctcttcttttcaagtgcgaatgctaagaaggacggcatgaacggctcgaacttcaacaac
cccgaagtcgacgcgaaactggagatcgccaacgagaacgccgacccgaacgcgcgtgcc
gatgcgttaaagaaagtgttcaagatcgccaacgaggaagtcgccgttgtgccgatcttc
tggcccgcctcggcaatggcgatcaacaacaaatacaagctcaccggctacactgccttt
tggtacaatattccgtgggcggtgcgaggtttcggcctaaagtaa
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