Sinorhizobium chiapasense: RB548_19865
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Entry
RB548_19865 CDS
T11111
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
schp Sinorhizobium chiapasense
Brite
KEGG Orthology (KO) [BR:
schp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
schp03016
]
RB548_19865 (truB)
Enzymes [BR:
schp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RB548_19865 (truB)
Transfer RNA biogenesis [BR:
schp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RB548_19865 (truB)
Prokaryotic type
RB548_19865 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
WVT03701
UniProt:
A0ABZ2BBJ8
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All DBs
Position
4192208..4193143
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AA seq
311 aa
AA seq
DB search
MSKPRKPKGRPISGWLILDKPLDFGSTEAVSKIKWLFKAQKAGHAGTLDPLASGMLPIAL
GDATKTVPYVMDGRKIYEFTAAWGEERTTDDLEGEVVRASVERPTEEAIRTLLPKYTGVI
SQVPPQFSAIKIDGERAYDLARDGEAVEIPARDVEVFRLSLIGCTPHLAHFEIECGKGTY
VRSLARDMGRDLGCFGHIASLRRTFVAPFGEDDMVPLSDLVALEKIEDDVERLAALDDFL
IETGEALSGLPHIAVNDDQAHRLKMGNPIILRGREAPLPAPEAYATARGKLVAIGEIAEG
EFRPKRVFATS
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaccgcgcaaaccgaagggtcgcccgatctcgggctggcttatcctcgacaag
ccgctcgactttggttccaccgaggccgtttccaagatcaagtggctgttcaaggcgcag
aaggcgggacatgccggcacgctcgacccgctggcctccggcatgctgccgatcgcgctc
ggtgacgcgacgaaaaccgtcccctacgtgatggatgggcggaagatctacgagttcacc
gccgcctggggcgaggagcggacgaccgacgatctcgagggcgaagtcgtccgcgcgtcc
gtggaacggccgacggaagaggctatccgcaccctgctgccgaaatataccggtgtgatc
agccaggtgccgccgcaattctcggcgatcaagatcgacggcgaacgcgcctacgatctc
gcgcgcgacggggaggcggtggaaattccggcccgcgacgtggaggtcttccggctctcc
ttgatcggatgcacgccgcatctcgcgcatttcgagatcgaatgcggcaagggaacctat
gttcgctcgcttgcccgcgacatgggccgcgatctcggctgcttcgggcatatcgcctcg
ctgcgccgcactttcgtggcgcccttcggcgaggatgacatggtaccgctttccgacctc
gtcgcgcttgagaagatcgaggacgatgtcgagcggctcgccgcgttggatgacttcctg
atcgaaacgggcgaggctctttccggcctgccgcacatcgccgtcaacgatgatcaggcc
catcgcctcaagatgggcaatccaatcatcctgcgtggccgcgaggcaccattgcccgcc
cccgaggcctatgcgacggcgcgcggcaagctcgtggcgatcggcgagatcgccgaaggc
gaattccggccgaagcgggtgttcgccacgtcttga
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