Sinorhizobium chiapasense: RB548_24215
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Entry
RB548_24215 CDS
T11111
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
schp Sinorhizobium chiapasense
Pathway
schp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
schp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RB548_24215 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schp03019
]
RB548_24215 (groL)
03110 Chaperones and folding catalysts [BR:
schp03110
]
RB548_24215 (groL)
03029 Mitochondrial biogenesis [BR:
schp03029
]
RB548_24215 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
schp04147
]
RB548_24215 (groL)
Enzymes [BR:
schp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RB548_24215 (groL)
Messenger RNA biogenesis [BR:
schp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RB548_24215 (groL)
Chaperones and folding catalysts [BR:
schp03110
]
Heat shock proteins
HSP60 / Chaperonin
RB548_24215 (groL)
Mitochondrial biogenesis [BR:
schp03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RB548_24215 (groL)
Exosome [BR:
schp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RB548_24215 (groL)
Exosomal proteins of other body fluids (saliva and urine)
RB548_24215 (groL)
Exosomal proteins of breast cancer cells
RB548_24215 (groL)
Exosomal proteins of colorectal cancer cells
RB548_24215 (groL)
Exosomal proteins of bladder cancer cells
RB548_24215 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
WVT06451
LinkDB
All DBs
Position
pSchITTGS70c:complement(327640..329268)
Genome browser
AA seq
542 aa
AA seq
DB search
MPVKEVKFHSDARERMLRGVDTLANAVKVTLGPKGRNVVIDKSFGAPRITKDGVTVAKEI
ELEDKFENMGAQMLREVASKTSDIAGDGTTTATVLAQAIVREGAKAVASGMNPMDLKRGI
DLAVDTLVAELKANARDVSKNEEIAQVGTISANGDAEIGRYLAEAMEKVGNDGVITVEEA
KTAETELEVVEGMQFDRGYISPYFITNQDKMRAEFEDPYILIHEKKLSNLQAMLPLLEAV
VQSGKPLIIIAEDVEGEALAALVVNKLRGGLKVAAVKAPGFGDRRKAMLEDVAILTAGTV
ISEDLGIKLENVTLEMLGRAKKVSIEKENTTIIDGAGAKADIDGRIAQIKAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGSTEVEVKERKDRVDDALHATRAAVEEGIVPGGGVALL
RAVKALDSVQTANDDQRVGIDIVRRAIEAPVRQIAENAGAEGSIIVGKLREKPELSYGWN
AQTGEFGDLFSMGVIDPAKVVRTALQDAASIAGLLVTTEAMIAEKPRKDAPPAMPPGGGM
DF
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtcaaagaagtaaaattccattccgatgcccgtgaacgcatgctgcgcggtgtc
gacacccttgccaacgccgtcaaggtgacacttggccctaagggccgcaatgttgtcatt
gacaagtccttcggcgcgccacgcatcaccaaggacggcgttaccgtggcgaaggagatc
gagctcgaagacaagttcgagaacatgggcgcgcagatgctgcgcgaagttgcgtcgaaa
acgagcgacattgcgggcgacggcaccaccaccgcgacggtgctcgcccaggcgatcgtc
agggaaggcgccaaggccgttgcctccgggatgaacccgatggatttgaaacgaggcatc
gacctcgccgtcgacactctcgtcgccgagctgaaagccaacgcgcgcgacgtttccaag
aatgaggaaattgcccaggtcggcaccatctcggccaatggtgacgcggagatcggccgt
tacctcgccgaggcgatggagaaggtcggcaatgacggcgtgatcacggtcgaggaagcc
aagaccgcggagacggaactcgaggtggtcgagggaatgcagttcgaccggggttacatc
tcgccttacttcataacgaaccaggacaagatgcgggcggagttcgaggatccctacatc
ttgatccatgaaaagaagctctccaacctgcaggccatgctgcccctcctcgaagccgtc
gtacaatcgggtaagccgcttatcatcatcgccgaggacgtcgaaggcgaagcgctggcc
gcactcgtcgtcaacaagctgcgcggcggactgaaggtcgctgccgtcaaggcccctggg
ttcggcgaccggcgtaaggccatgctcgaggatgtagcaatcctgacggcagggaccgtg
atctccgaagacctcggcatcaagctggaaaacgtcacgctcgagatgctcggccgtgca
aagaaggtctcgatcgagaaggagaacaccacgatcatcgacggcgccggcgcgaaagcc
gacattgatgggcgcatcgcgcagatcaaggcgcagatcgaagagacgacatccgactat
gatcgcgagaagctgcaggagcggcttgccaagctcgccggcggcgtcgcagtcatccgc
gtcggcggctcgacggaagtcgaagtgaaggaacggaaggaccgcgtcgacgatgcgctt
cacgcaacgcgtgctgcagtcgaggaaggcatcgtgccgggcggcggcgtggcactgctg
cgtgcagtcaaggccttggatagcgtgcagaccgccaacgacgatcagcgggtcggtatc
gacatcgtccgccgcgccattgaggctccggtacggcagatcgccgagaacgccggtgcg
gaaggctcgatcatcgtgggcaagctgcgcgagaagccggaactctcctatggctggaac
gcccagaccggcgaattcggcgacctcttctcgatgggggtaatcgacccggccaaggtc
gtccgtaccgcgcttcaggatgcggcctcgattgccggcctgctggttaccaccgaagcg
atgatcgccgagaagcccaggaaggacgcaccgccggcaatgcctccgggcggtgggatg
gacttctag
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