Sinorhizobium chiapasense: RB548_28170
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Entry
RB548_28170 CDS
T11111
Name
(GenBank) PAS domain-containing protein
Organism
schp Sinorhizobium chiapasense
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS
PAS_4
PAS_9
HATPase_c
PAS_8
HisKA
PAS_11
HATPase_c_5
HATPase_c_2
Peptidase_U4
Motif
Other DBs
NCBI-ProteinID:
WVT08036
UniProt:
A0ABZ2BNB4
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Position
pSchITTGS70d:750586..752958
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AA seq
790 aa
AA seq
DB search
MIAMLPQQRAALMLTVSFVGIAASWLTTTPSGLLAPVAALFFYAHRRTAPLLLALLAIAF
AGSMLAAFFLSDGMRDVASSSAAFFAVALCIGAVIAASMSASFDADAPGAVMRSTPGEGT
SARINKWRESITGAGYEEGTAHDGPPSPSIEKTEEALRARERELSQLIDMVPSHLWRLTP
DGEPTFFNRRMVDFLGMDVTDTDKPGTSRLEVVIGSVHPDDATELRDALSRCLVTGEGFA
MRYRLRRADGAYRWMSSRAEPLRDQDGRIVQWYGLCHDIDDQVHAEEALRRSERQLQQLI
DAVPALIWCTTPEGIPCYLNKRVTDVTGIRLKDLIAPDGSRYLTVVHPDDRDAVDRGLAR
SFETGESFVGRYRQRRSDGACRWVESRAEPLRDESGAIIQWYGVSVDIDDLIGAQEALRD
RERELSQLVDMVPSLLWRLTANGEPTFFNERMVDFLGMDVSDADKPGMSRLETVIETVIH
PDEKAELSNVLSRCLVTGKGFAMRYRLRRADGVYRWMSGRAEPLRDDSGHIVQWFGLCHD
IDDQFRAEEALRRTSDRLAQATRVASLAELSASLAHEVNQPLAAIVASSHACHHWLSAEP
PNVERAKITAERIIRSAGSAADVISRIRALFRPAAQDRSPEDVNHLIGEVCRLMAGEIAA
KDVRIRTNLEPDLPPVALDRVQVQQVLVNLIRNGIEAMDAVVDASRALQIRSCRDGLNAI
RVEVRDAGTGFKDAERAFEPFFTTKPHGMGMGLSICRSIIDSHGGRLWSADNQTHGATVA
FTLPLGLSTL
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgatagcaatgcttccgcaacagcgcgcagccctcatgctcacggtatccttcgtcggg
atcgccgcgtcctggttgacgacgacaccgtctggcctgctggctccggttgccgcgctg
ttcttctatgcgcatcgccggacggctccgctgctgctggcgctgttggcgatcgcattc
gccggctcgatgctggccgcgttcttcctttcggacggcatgcgcgatgtcgcatcgtcg
tcggcggcgttctttgctgtggcgctgtgcatcggagcagtcatcgccgccagcatgtcg
gcgtctttcgacgccgacgcaccgggagcggtgatgcggagcacgccgggcgaaggaact
tccgctcgtatcaacaaatggcgcgaaagcataactggcgccggttacgaggaagggact
gcgcacgacgggccgccatccccgagcatcgagaagaccgaagaggcgttgcgcgcgcga
gaacgggagctttcgcagctcatcgacatggttccgagccatctctggcggctgacgccc
gacggcgagccgaccttcttcaacaggcggatggtggactttctcggcatggacgtaacc
gacacggacaagccgggcacgagccggctggaggtggtcataggaagcgtccatccggac
gatgcaacagagctcagggacgcccttagccgttgcctggtcacgggcgagggctttgcc
atgcggtatcgcctgcggcgcgccgacggcgcctaccgctggatgtcgagccgcgccgag
ccattgcgagatcaagacggacgcatcgtccagtggtacggcctctgccacgacatagac
gaccaggtgcacgctgaggaggcgctgcggcgtagcgagcgccagttgcagcagctcata
gacgccgtgccagcactcatctggtgcacgacgccagaaggaataccttgctacctcaac
aagcgagtcacggatgtgaccggcatccgtctgaaggatttgatcgcgcctgacggctcg
cgatacctgacggtcgtccacccggatgaccgggacgcggtggaccgcgggctcgcacgc
tcattcgagacgggcgagtccttcgtggggagatatcgtcagcgccgatccgacggcgcc
tgtcgttgggtcgagagtcgcgcggagcccttgcgtgacgagtccggcgcgatcatccag
tggtatggcgtgtccgtcgacatcgacgacctgataggggcgcaggaggcgttgcgcgac
cgggagcgcgagctttcgcagctcgtcgacatggttccgagtctgctctggcggctgacg
gcgaacggcgagccaaccttcttcaacgagcgtatggtcgatttcctcggcatggacgta
tcggatgcggacaaaccggggatgagccgactggagacggtcatagagaccgtcatccat
ccagatgagaaagcggagctcagcaatgtcctcagccgttgcctcgtgaccggcaagggc
ttcgcaatgcggtatcgtctgcgtcgtgcggatggggtgtatcgctggatgtcgggccgc
gccgagccactgcgagatgacagcggacacattgtccagtggttcggcctctgtcacgac
atcgacgatcagttccgcgccgaagaggcgctgcggcgcacctccgacaggctcgcgcag
gcgacccgggtggcaagcctggccgagctttccgcctcgctcgctcacgaagtgaaccag
ccgctggccgcgatcgtcgccagttcccacgcatgccaccattggctgtccgccgaacct
ccgaacgtcgaacgtgcgaagatcacggccgagcgcatcatccggagtgccggctcggcg
gcggatgtcatcagccgcattcgcgctctcttccgtccggcggcgcaagacaggtcgccg
gaggacgtcaaccatctgatcggcgaagtgtgccggctgatggctggcgagatcgccgca
aaggacgttcgcatcaggacgaatctcgagccggatctaccgccggtcgcgctcgatcgc
gtccaggtgcagcaggtgttggtgaacctgatccggaacggaatcgaggcgatggacgcc
gtggttgacgcctctcgcgcgctccagatacgctcatgccgtgacggcttgaacgcgatt
cgcgtcgaggttcgcgatgccgggacgggtttcaaggacgccgagcgcgccttcgagccg
ttcttcacgaccaagccgcacgggatgggtatggggctttcgatctgccgttcgatcatt
gactcacatgggggccgcctctggtcggccgataaccagacgcacggggcgaccgtcgcc
ttcacgcttccgttgggcctcagtacattatag
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