Sinorhizobium chiapasense: RB548_28370
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Entry
RB548_28370 CDS
T11111
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
schp Sinorhizobium chiapasense
Pathway
schp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
schp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RB548_28370
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
schp02000
]
RB548_28370
Transporters [BR:
schp02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RB548_28370
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
WVT08075
LinkDB
All DBs
Position
pSchITTGS70d:796606..798216
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AA seq
536 aa
AA seq
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MNDKITNWTGSDDAMVENAIRRGATRRELLQMMLAGGVALSAGSLVLGRASHAVAAAPVS
GGALKAAGWSSSTADTLDPAKASLSTDYVRCCSFYNRLTFLDKSGTPQMELAEAIESKDA
KTWTVKLRSGVTFHDGKPLTADDVIFSLKRHLDPSVGSKVAKIAAQMTGFKAVDKQTVEI
MLANPNADLPTILSMHHFMIVADGTTDFSKGNGTGAFVREVFEPGVRSVGIKNKNYWKSG
PHVDSFEYFAISDDSSRVNALLSGDIHLAATINPRSMRLVESQGDGFVLSKTTSGNYTNL
NIRMDMEPGSKRDFVEGMKYLVNREQIVKSALRGLGEVGNDQPVSPANFYHNGDLKPRAF
DPEKAKFHFEKAGLLSQSIPVIASEAANSSIDMAMIIQASAAEIGLKLDVQRVPADGYWD
NYWLKAPVHFGNINPRPTPDILFSLLYTSEAPWNESQYKSEKFDKMLIEARGSLDQEKRK
AIYNEMQVMVANEAGTIIPAYISNVDAITAKLKGLEANPLGGQMGYAFAEYVWLEA
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacaaaatcaccaattggaccggatccgacgacgccatggtcgaaaacgccatc
cgccgcggagcgacacgccgtgaactgctgcagatgatgctcgccggtggcgttgccctc
tccgccggcagtctcgtgctcggccgcgcctcccatgctgttgctgcggcgccggtctcc
ggcggcgcgctcaaggcggccggctggtcgtcctcgaccgccgacacgctcgacccggcc
aaagcatcgctctccaccgactatgtccgctgctgctccttctacaaccgtctcaccttc
ctcgataaaagcggcaccccgcagatggagttggccgaggcgatcgagtccaaggatgcg
aagacctggacggtcaagctgaggagcggcgtcactttccatgatggcaagccgctgacc
gccgacgatgtgatcttctcgctgaaacgccatctcgatccgtccgtcggttcgaaggtc
gccaagatcgccgcgcagatgacgggcttcaaggccgtcgacaagcagacggtcgagatc
atgctcgccaatccgaacgccgatctgccgaccatcctctcgatgcatcacttcatgatc
gtcgccgacggcaccaccgacttctccaaggggaacggcaccggcgctttcgtgagagaa
gtctttgagcccggcgtgcgctcggtcggcatcaagaacaagaactactggaagtccggc
ccgcacgtcgattccttcgaatatttcgcgatcagcgacgatagctcccgcgtcaatgcg
ctgctctccggcgatatccacttggccgctacgatcaatccgcgctcgatgcgcctggtc
gagagtcaaggcgacggcttcgtcctgtcgaagaccacttcgggcaactacaccaatctc
aacatacgcatggacatggagcccggcagcaaacgggacttcgttgagggcatgaagtac
ctggtcaatcgcgagcagatcgtcaagtcagcgctccgcggcctcggagaagtcggcaac
gaccagccggtttcgccggccaacttctaccataatggcgacctgaagccgcgggcgttc
gatccggagaaggcgaaattccatttcgagaaggccggtctcctcagccagtcaatccct
gtgatcgcttccgaggcggcaaactcctcgatcgacatggcaatgatcatccaggcctcc
gccgccgagatcggcctgaagcttgacgttcaacgcgttccggccgacggctattgggac
aattattggctcaaggcgccggttcatttcggcaacatcaacccgcgtccgacaccggac
atcctgttctcgttgctctatacttcggaagcgccgtggaacgagagccagtacaagtcg
gagaagttcgacaagatgctgatcgaggcgcgcggctcgctcgaccaggagaagcgcaag
gcgatctacaacgagatgcaggtgatggtcgccaacgaggccggcactatcattccggcc
tatatctccaatgtcgacgcgatcaccgccaagctcaagggcttggaagccaacccgctt
ggcggccagatgggttatgccttcgcggagtatgtctggctcgaagcctga
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