KEGG   Sinorhizobium chiapasense: RB548_28820
Entry
RB548_28820       CDS       T11111                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
schp  Sinorhizobium chiapasense
Pathway
schp02020  Two-component system
Brite
KEGG Orthology (KO) [BR:schp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    RB548_28820
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:schp02022]
    RB548_28820
Two-component system [BR:schp02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   RB548_28820
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_lid_14 HTH_8 AAA_5 HTH_50 AAA_2 AAA_16 FleQ AAA_22 TadZ_N AAA Tnp_IS2_N PDE8A_N AAA_3
Other DBs
NCBI-ProteinID: WVT06797
UniProt: A0ABZ2BH39
LinkDB
Position
pSchITTGS70d:887320..888684
AA seq 454 aa
MTESRVLLVDDEEELRHSSAQALELAGFRVDTFASAEHALEFIGFSFSGVVISDIRMPGM
DGMTFLQRIREIDAEVPVILVTGHGDVQLAVRAMREGAYDFVEKPFTAQALAGTIRRALE
WRGLVLENRRLRAVAGKRDDIEQRLPGRSQAMVDLRYKIRAIGASDADTLIIGETGVGKE
VVARALHDLSSRANSPFIAINCAALPETLIESELFGHEAGAFPGALRPRYGKFEHGRGGT
ILLDEIGSMPFDLQAKFLRVLQERVITRLGSNEIVSLDVRFVATSKVDLESEVAAGRFRA
DLLYRLNVATLRVPPLAQRRSDIPLLFMQLVRESAARYGRDDVEISPALASEIAERDWPG
NVRELRNAAERFVLGLEAEQDDVTSTRPNGARLADKVAAFEKSLIASALAAHGGALKPVY
ESLGISRKTLYEKMQKFGLDKRLLAADAPHGDGT
NT seq 1365 nt   +upstreamnt  +downstreamnt
atgaccgagagccgtgtcctgctcgttgatgatgaagaggaacttcgccattcgagcgcc
caggcgctcgagcttgcaggttttcgcgtcgacacattcgccagtgccgaacacgcgctc
gagttcatcggcttcagcttttcaggcgtggtgatcagcgacattcgcatgccgggtatg
gatggcatgaccttccttcagcgtatacgtgaaatcgacgccgaggtcccggtgatcctc
gtgaccggtcacggcgacgtccagctcgccgttcgagcgatgcgcgaaggcgcttacgat
ttcgtcgaaaaacccttcacggcccaagcgcttgccggcaccattcgtcgcgcgctcgag
tggcgcggcctcgtgcttgaaaaccgccgcctgagagcggttgcgggaaagcgcgacgac
atcgagcaacggctgccagggcgaagccaggcgatggtcgacctgcggtacaagatccgc
gccatcggcgcatccgatgccgatacgctgatcatcggagaaaccggtgtcggcaaggaa
gtcgtggcacgcgcactccatgacttgagcagccgcgccaacagccccttcattgccatc
aattgtgccgcccttccggaaacgctgatcgagagcgaactttttggccatgaggcgggc
gcctttccgggcgcgttgcgaccgcgctacggcaaattcgagcatgggcgcggcggcacg
atcctgctcgacgagatcggctcaatgcctttcgatctccaggcgaagttcctgcgcgtg
ctgcaggaacgggtcataacccggctcggctcgaatgaaatcgtgtcgcttgacgtacgc
ttcgtcgccaccagcaaggtcgatctggagtcggaggtcgccgccggccgtttccgcgcc
gatctgctctatcgcttgaacgtcgcgacgctgcgtgtgccgccgcttgcccagcgccgt
tccgacattccgctgcttttcatgcagcttgtgcgcgaatccgccgcgcgctacggccgc
gacgacgtcgagatctcccctgctctggcctcggaaatcgccgagcgcgactggcccgga
aacgttcgcgaattgcgcaacgcggccgaacggttcgtgctcgggctggaagccgaacag
gacgacgtcacgtccacgcggccgaacggcgcgcgtctcgccgacaaggtcgccgcgttc
gaaaagagccttatcgcaagcgcacttgcggcccatggcggtgcgctgaagcccgtctac
gaatctctcgggatctcgcgcaagacgctctatgaaaagatgcagaaattcggtctcgac
aagaggcttttggcggcagacgcaccacacggcgacggcacgtga

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