Sinorhizobium chiapasense: RB548_29875
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Entry
RB548_29875 CDS
T11111
Name
(GenBank) peptidase domain-containing ABC transporter
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
schp Sinorhizobium chiapasense
Pathway
schp02010
ABC transporters
schp03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
schp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RB548_29875
03070 Bacterial secretion system
RB548_29875
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
schp02000
]
RB548_29875
02044 Secretion system [BR:
schp02044
]
RB548_29875
Transporters [BR:
schp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
RB548_29875
Secretion system [BR:
schp02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
RB548_29875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
AAA_21
AAA_16
Zeta_toxin
ABC_ATPase
AAA_22
AAA_30
SbcC_Walker_B
UQCC3
DUF6170
AAA_18
nSTAND3
MoeA_C
AAA_15
PRK
MobB
DUF87
AAA_29
Motif
Other DBs
NCBI-ProteinID:
WVT06984
LinkDB
All DBs
Position
pSchITTGS70d:1133930..1136074
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AA seq
714 aa
AA seq
DB search
MSTNPHTSLQCLVLVARHHGIDLSPERLLHDYALADQPVATRQLLRMAKDAGLRARHVHL
TWRSLFQMGGAYPALAELENGNWVVIAGVATDSEEEAIRILDPLAARPEFIVLNESQFSK
AWRGSAVLLKRNYRLGDDDQPFGFRWFLPEIIRQRGLFRDVALAAIALYGLGLTTPIFFQ
LVIDKVLVHQSYATLTVLTIGIAVALVFDAAFSFLRRYLLLYATNKIDIRIATRTFGHLL
NLPIALFEQASAGVLVKHMQQTGRIREFLTGRLFLTLLDGLSLLVFVPILALYSVKLTFV
VLGFAALVGLVVMMLVGPFQQRLQALYQAEGDRQAMLVETVHGMRTVKSLALEPRQRRVW
DDHSARSISVRFRVEKISTFAQAITGLLEKLMSVAIVGLGALDVFSGSMTIGALVAFNML
AGRVSGPLVQIVTMIHEYQEVALSVRMLGEIMNQRPEQFGRGRGLRPDLKGLIEFDRVTF
RYGPDGAPALDDVSFTVPAGSVFGIVGKSGSGKTTVTRLIQGLYQNQQGLVRIDGHDSRE
IDLVHLRKSIGVVLQDNFLFRGTVRENIAAARTDASIEEIAAAARIAGAEEFIERLPRGF
ETLLEENASNLSGGQKQRLAIARALITDPRLLILDEATSALDPDSEAIVRQNLSKIAEGR
TVIIVSHRLSTLVDADAILVIERGKIADIGRHDQLVSRCMTYRHLWSQQTRQSA
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccaatccgcataccagtcttcagtgtctggtccttgtcgcccgtcaccatggc
atcgacctttcgcccgaacggctgctgcatgactacgcattagcggaccagccagtcgcg
acccggcagctcctgcgcatggcgaaggatgccggcttgcgtgcccggcacgtgcatctc
acctggcggtcgctctttcagatgggcggcgcctatcccgcgcttgccgaactcgagaac
ggcaattgggtcgtcatcgccggcgttgcgaccgacagcgaggaagaggcgatccggatt
ctcgatccgctggcggcgcggcccgaattcatcgtcctcaatgaaagccagttttccaag
gcgtggcgcggctccgcggtcctcctgaagcgcaactaccgtctcggcgacgatgaccag
ccgttcggctttcgctggttcttgccggagatcatacgccaacgcgggcttttccgggac
gtcgcgctggcagccatcgccctttacggacttggcctcaccacgccgatctttttccag
ctcgtcatcgacaaggtgctggtgcaccagagctacgcaacgctgacggttctcaccatc
ggcatcgcggttgcactggtcttcgatgccgccttctcctttctgcggcgctatctcctg
ctctacgcgaccaacaagatcgatatcaggatagcgacgcgcaccttcgggcatctcctg
aacctgccgatcgcgctcttcgaacaggcgtccgccggtgtcctcgtgaagcacatgcag
cagaccgggcgcattcgcgaatttctgaccggcaggctctttctcaccctgctcgacggg
ctttcgctcctggtgttcgtgccgatcctcgccctctacagcgtcaagctcaccttcgtg
gtgcttggctttgccgcgctggtgggcctcgtggtcatgatgctggtggggccattccag
caacggctccaggctctctaccaggctgagggcgaccgacaggcgatgctcgtggagacg
gtccacggcatgcgcacggtcaagtcgctggcgctcgagccgcgtcagcgccgggtgtgg
gacgaccattcggcccggtcgatctccgtgcgcttccgggtcgagaagatttcgacattc
gcgcaggccataacggggctcctggaaaaactgatgagcgtcgcgatcgtcggactgggc
gcattggacgttttcagcgggtccatgacaatcggcgcgctcgtcgcattcaacatgctg
gccggccgggtttccgggccgctcgtccagatcgtcaccatgatccatgaatatcaggag
gtagcgctttccgtgcgcatgctcggcgagatcatgaaccagcgcccggaacaattcggg
cgcggacgcgggctcaggcccgacctgaagggactgatcgagttcgacagggtgactttc
cgatacgggcccgacggcgcccctgcactcgacgatgtctccttcacggttcccgcaggc
tccgtcttcggcatcgtcggcaagagcggctcgggaaagacgaccgtcacccggctcatc
cagggcctctatcagaaccagcaggggctcgtgcgcatagacggccacgacagccgggag
atcgatctcgttcacctgagaaagagcatcggcgtcgtgttgcaggacaatttcctgttc
cggggaacggttcgcgaaaacatcgcagcggcaaggacggatgcgagcatcgaggagatc
gccgccgccgcacgcattgccggcgccgaggagttcatcgagcgactgccgcgcggcttc
gaaaccctgctcgaggaaaatgcctccaatctctccggtggccagaagcagcgccttgcc
atcgcccgcgcgttgatcaccgatcccagattgctcattctcgacgaggcgacgagtgct
ctcgaccccgacagcgaggcgatcgtcaggcagaacctctccaagatcgccgaggggcgc
acggtcatcatcgtctcgcatcgtctgtccaccctcgtcgatgccgatgcgatcctcgtc
atcgagcgcggcaagatcgccgacatcggccgtcacgaccagctcgtttcacgctgcatg
acctatcgccacctctggtcgcagcagacaaggcagtccgcatga
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