Staphylococcus chromogenes: DWB92_03700
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Entry
DWB92_03700 CDS
T06648
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
schr
Staphylococcus chromogenes
Pathway
schr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
schr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DWB92_03700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schr03019
]
DWB92_03700
03009 Ribosome biogenesis [BR:
schr03009
]
DWB92_03700
Enzymes [BR:
schr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DWB92_03700
Messenger RNA biogenesis [BR:
schr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DWB92_03700
Ribosome biogenesis [BR:
schr03009
]
Prokaryotic type
rRNA helicases
DWB92_03700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Flavi_DEAD
SUa-2TM
AAA_30
AAA_19
CMS1
Cas3-like_C_2
TetR_C_5
ACP_syn_III_C
Motif
Other DBs
NCBI-ProteinID:
QDW81932
LinkDB
All DBs
Position
791617..793104
Genome browser
AA seq
495 aa
AA seq
DB search
MQNFTSLGVSERTAETLEAMGFTEPTPIQKDSIPSALKNLDILGQAQTGTGKTGAFGIPL
IEKVVGKEGVRALILAPTRELAMQVAEQLREFSRGQKVQVVTVFGGMPIDRQIKSLKKGP
QIVVGTPGRVIDHLNRRTLKTQDIDTLILDEADEMMNMGFIDDMRYIMDKLPSDNRQTML
FSATMPKAIQELVQKFMKSPEIIKTMNNELSDPQIDEYYTIVKELEKFDTFTNFLDVHQP
ELAIVFGRTKRRVDELTSALLSKGYKAEGLHGDITQAKRLEVLKKFKNDQIDILVATDVA
ARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKQGMAVTFVNPIEMDYIRQIEQANH
RQMRALRPPHRKEVLRAREEEIKSKVENWMAVTKEPRVESIAKQLLEEYDQTDLVTALLQ
ELVESNDEVEVQLTFEKPLARKNRQPKGNRKGGGGKRHSKSRRGNKPNFNKKGNGFKDKR
ENKVKKGRTFADHQK
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaattttacaagcttaggtgtttcagaaagaacagctgaaacattagaggcgatg
ggatttacggaacctacaccgatacaaaaggatagcatcccatcagctcttaaaaattta
gatattttgggccaagcacaaactggaacaggaaaaacaggtgcatttggtatcccatta
attgaaaaagtagttggtaaagaaggtgtacgtgccctcatcttagcaccaacacgtgaa
cttgcgatgcaagttgcagaacaattaagagaattcagccgtggtcaaaaagttcaagtt
gtcactgtatttgggggtatgccgatcgaccgtcaaatcaaatcattgaaaaaaggtcct
caaattgtcgtgggtacacctggccgagttatcgatcacttaaaccgtcgtacattgaaa
acacaagacatcgatacattaattttagatgaagctgatgaaatgatgaatatgggcttt
atcgatgatatgcgctacattatggataaattgccatctgataatcgacaaacaatgctt
ttctcagcaacaatgccaaaagcgattcaagaattagttcaaaaattcatgaagtcacca
gaaattattaaaacgatgaacaatgaactttcagatccacaaattgatgaatattatacg
atcgttaaagaattagaaaagttcgatacattcacgaatttccttgacgttcatcaacca
gaattagcgattgtgttcggtcgtacaaaacgtcgtgtcgatgaattgacaagtgcttta
ctatcaaaaggttataaagcagaaggtcttcacggagacattacacaagccaaacgttta
gaagtacttaaaaaattcaaaaatgaccaaattgacattttagtagcaacagatgttgca
gcacgtggtcttgatatttctggtgtaagtcatgtatataactttgacatccctcaagat
actgaaagttatacgcaccgtattggacgtacaggtcgtgcaggtaaacaaggaatggcc
gtgacatttgtgaatccaattgaaatggattatattcgtcaaattgaacaagccaaccat
cgtcaaatgcgtgcattacgtcctccacatcgcaaagaagtcttacgtgcacgtgaagaa
gaaattaaatctaaagttgaaaactggatggctgtgacaaaagaaccacgtgttgaaagt
atcgccaaacagttacttgaagagtacgatcaaacggacttagtgacagcacttcttcaa
gaattagtagaatctaatgatgaagttgaagttcaattgacttttgaaaaaccacttgca
cgaaaaaatcgtcaacctaaaggtaatcgtaaaggtggcggcggtaaacgtcattcaaaa
tcacgtcgtggtaataaaccgaactttaataaaaaaggcaatggctttaaagacaagcgc
gaaaataaagtgaaaaaagggcgcactttcgctgatcatcaaaaataa
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