Staphylococcus chromogenes: DWB92_05690
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Entry
DWB92_05690 CDS
T06648
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
schr
Staphylococcus chromogenes
Pathway
schr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
schr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DWB92_05690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
schr03400
]
DWB92_05690
Enzymes [BR:
schr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
DWB92_05690
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DWB92_05690
DNA repair and recombination proteins [BR:
schr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DWB92_05690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
TraI_2B
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
QDW82236
LinkDB
All DBs
Position
1151351..1152223
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AA seq
290 aa
AA seq
DB search
MPELPEVEHVKRGIQPFVEGADIEKVTFSSHVIKGKAEGKATIVKGMSLEAFEQFTVHFT
INRVYRKSKYILFDLSNGETQRMMISHLGMAGGFFVVKRIDDIAIANYRKHWHVIFHLSN
DWLLVYSDIRRFGEIRNVERIEEYPSLLEIAPEPFSEEALPHYLAQFEQKKFRKMPIKRM
ILEHRVISGCGNIYACEALFDAKINPHRLSQDLSQEERIRIFKSVVKVLELGILNGGTSI
SDYVHADGQRGSMQNNLKVYKQKCCPNCQNPIETAIIGGRNTHYCKYCQV
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
ttgccagaattacctgaagtagaacatgtaaaaaggggtattcaacctttcgtcgaaggg
gcagatatcgaaaaagttactttttctagtcatgtcataaaaggaaaagctgaagggaaa
gcgactattgttaaaggaatgagtttagaggcttttgagcaatttaccgttcattttaca
attaatcgtgtataccgaaaaagtaaatatattttgtttgacttatcgaatggtgaaact
caacgcatgatgatttcacatttaggtatggccggaggtttttttgtcgtcaaacgtatt
gatgatattgcaattgctaattatcgtaaacattggcacgtcatatttcatctgagtaat
gattggttattagtctattcagatataagaaggttcggtgaaattcgaaacgttgaacgt
attgaagaatatccttcgctattagaaattgctccagaaccttttagtgaagaagcttta
cctcattacttagcgcaattcgaacaaaaaaaattccgaaaaatgcccattaagcgtatg
atattagaacatcgagtgatttcaggctgtggaaatatttatgcttgcgaagcgttattt
gatgcgaaaataaatcctcaccgattgagccaagatttatctcaagaggaacgtattcgt
atttttaaaagtgttgtaaaagttttagaattgggtattttaaatgggggaacgagtatt
tctgactatgttcatgcagatggtcaacgtggttcaatgcaaaataatctaaaagtctat
aaacaaaaatgttgcccaaattgtcaaaacccaattgaaacggccatcatcggaggaaga
aatacgcactattgtaagtattgtcaagtttaa
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