Staphylococcus chromogenes: DWB92_07505
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Entry
DWB92_07505 CDS
T06648
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
schr
Staphylococcus chromogenes
Brite
KEGG Orthology (KO) [BR:
schr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
schr03016
]
DWB92_07505
Enzymes [BR:
schr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DWB92_07505
Transfer RNA biogenesis [BR:
schr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DWB92_07505
Prokaryotic type
DWB92_07505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Ig_TgrO1
Motif
Other DBs
NCBI-ProteinID:
QDW82544
LinkDB
All DBs
Position
complement(1524313..1525230)
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AA seq
305 aa
AA seq
DB search
MYHGILPVYKPRGMTSHDVVFKLRKILKTKKIGHTGTLDPEVDGVLPICIGQATKVSDYV
MDMGKTYQAEITLGIATTTEDQTGEVLEQTIIEEGDVTNTQIDQVLASFQGIITQIPPMY
SSVKVNGKKLYEYARRGETVERPARQVKITHIERLNQVDFDKECATFSIEVSCGKGTYIR
TLATDIGKQLNLPAHMSRLTRLESGGFHIDQALSLERIAEKHQNHTLSDFILPMIYGLKA
LPMVYIEDKQLKQRISNGQKLSRQQFNMTTQNQLVFVDAATDAVIAIYEAHPTHRTEIKP
KKVFN
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtaccacggtattttaccagtatataagccacgtggcatgacgagtcatgatgttgta
ttcaaattacgtaaaattttaaaaacgaaaaagataggacatacaggaacattagaccct
gaagttgatggggtattgcctatttgtatcggtcaagcgactaaggtgagcgattatgtg
atggacatgggtaaaacgtatcaagcagaaattaccttagggatagccacaacgactgaa
gatcaaacgggggaagtattggaacagacaattatcgaagaaggagatgtgaccaatact
caaattgatcaagttttagcttcctttcaaggcatcatcacacaaattcctccgatgtac
tcttctgtcaaagtcaacggtaagaaactttatgaatatgctagacgtggagaaacagta
gaacgcccggcgagacaagtcaagattacgcacatagaaagattaaatcaagtggatttt
gataaagaatgtgctacatttagtatagaagtatcatgtgggaaaggcacttatattcgg
acattagcaactgatattggaaaacagttgaacttgccagcacatatgtcgcgattgacg
cgtttggaaagtggtggctttcatatagaccaagcattatcactggaaaggattgcagaa
aagcatcaaaaccatacattgtctgattttattttacctatgatatatggattaaaagct
ttgccaatggtttacatagaggacaaacaattaaagcaacgtatttcaaatggtcaaaaa
ttgtcgcgacaacaatttaatatgaccacacaaaatcaacttgtttttgtggatgcagcg
actgatgcagttatagctatttacgaagcacatcctacacatcgcactgaaattaaaccg
aaaaaggtgtttaactaa
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