Staphylococcus chromogenes: DWB92_07620
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Entry
DWB92_07620 CDS
T06648
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
schr
Staphylococcus chromogenes
Brite
KEGG Orthology (KO) [BR:
schr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
schr03032
]
DWB92_07620
03400 DNA repair and recombination proteins [BR:
schr03400
]
DWB92_07620
Enzymes [BR:
schr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DWB92_07620
DNA replication proteins [BR:
schr03032
]
Prokaryotic type
DNA Topoisomerases
DWB92_07620
DNA repair and recombination proteins [BR:
schr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DWB92_07620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_RPB9
Toprim_2
Stap_Strp_tox_C
HypA
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
QDW82563
LinkDB
All DBs
Position
complement(1549842..1551911)
Genome browser
AA seq
689 aa
AA seq
DB search
MADNLVIVESPAKAKTIEKYLGKKYKVIASMGHVRDLPRSQMGVDVEHDYDPKYITIRGK
GPVVKDLKRYAKKAKKVFLASDPDREGEAIAWHLAHILELEDSKENRVVFNEITKDAVKE
SFKHPREIEMNLVDAQQARRVLDRLVGYNISPVLWKKVKKGLSAGRVQSVALRLVIDREN
EIRNFKPEEYWSIEGEFRHKKSKFTAKFLHYKGKPFKLSTKDDVDIITKALDGNEFEVSN
VTKKEKTRRPANPFTTSTLQQEAARKLNFKARKTMMVAQQLYEGIDLKRKGTVGLITYMR
TDSTRISKDAQAEAKKYIQSEYGEAYLTKAVSKGKQGDQDAHEAIRPTSTLRTPSEMKAF
LTRDQYRLYKLIWERFVASQMAPAILDTVAVDLTQNDVKFRANGQTIKFKGFMTLYVEAN
DDKDKEKENRLPELKVGDTALATKIDPAQHFTQPPPRYTEARLVKTLEELKIGRPSTYAP
TIDTIQKRNYVKNESKRFVPTELGEIVHEQVKDYFPEIIDVDFTVNMETLLDKIADGDIA
WKKVVSDFYNSFKQDVERAESEMEKIEIKDEPAGEDCEKCGSPMVIKMGRYGKFMACSNF
PDCRNTKAIVKPIGVKCPTCKEGDVVERKSKKNRIFYGCSRYPECEFVTWDKPVGRDCPK
CNHYLVESKKGRSSQVVCSNCDYKEEVQK
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
ttggcagataatcttgtcattgttgaatcgcctgcaaaagctaaaacgatagaaaaatat
ttaggaaaaaaatacaaagtaatcgcatccatggggcacgtacgagacttaccaagaagt
caaatgggtgttgatgttgaacatgactatgatcctaaatatattacaatacgcggtaaa
ggaccagtcgttaaagacttaaaaagatatgctaaaaaggcgaaaaaagtttttctagct
agtgaccccgaccgtgaaggtgaagcaattgcatggcatttagcacatatattggaatta
gaggatagtaaagaaaatcgtgtcgtatttaacgaaatcactaaagacgcagttaaagaa
agttttaaacatccaagagaaatcgaaatgaatcttgttgatgcccaacaagcacgacgt
gtattagatcgtcttgtaggatataatatttcaccggtattatggaagaaagttaaaaaa
ggcttatcggcaggccgtgtacaatctgtggcacttagattagtcattgaccgtgaaaat
gaaattcgtaactttaaacctgaggaatattggtctattgaaggagaattccgacacaaa
aaatcgaaattcactgccaagtttcttcattataaagggaaaccatttaagttatcgacg
aaagatgatgtcgacatcatcactaaagcgttggatggtaacgaatttgaagtatccaac
gtgacgaaaaaagaaaaaacacgtcgcccggcaaatccgtttaccacttctacattacaa
caagaagccgcgcgcaaactaaattttaaagcccgtaaaacgatgatggttgcgcaacaa
ttatatgaaggtatcgatttaaaacgtaaaggaactgtaggattaatcacctatatgcgt
accgactctactcgtatttctaaagatgcgcaagctgaagctaaaaaatatattcaatct
gaatatggggaagcttatttaacgaaagctgtgtcgaaaggaaaacaaggtgaccaagat
gcgcacgaagcgattcgtccaactagtactttacgtacgccatctgagatgaaagcattt
ttaacacgtgatcagtatcgcttgtacaagctaatttgggaacgctttgttgcaagccaa
atggcacccgcaatattagacacggttgcagttgatttaacgcaaaatgatgttaaattt
agagctaatggacaaacaattaaatttaaaggctttatgacgctttacgtcgaagcaaat
gacgataaagataaagaaaaagaaaatcgtttacctgaattaaaagtaggcgatacagcg
ctcgcaactaaaattgatccggcgcagcattttacccaaccgccacctcgatacactgaa
gctcgtcttgttaaaacacttgaagaattaaaaattggtcgtccatcaacttatgcgcca
acgattgatacaattcaaaagagaaattatgttaaaaatgaaagtaagcgctttgttccg
actgaactcggtgaaatcgttcatgaacaggtaaaagattatttccctgaaatcattgat
gttgattttactgtgaacatggaaacactgctcgataaaatagcagatggagacattgca
tggaaaaaagtagtcagtgacttttataacagttttaaacaagatgttgagcgcgctgaa
tctgaaatggaaaaaatcgaaattaaagatgaacctgcaggcgaagattgtgaaaaatgt
ggtagtccaatggtcatcaaaatgggtcgatatggaaagtttatggcatgttcgaacttt
ccggactgccgaaatactaaagctatcgtgaaacctataggagtaaaatgtcctacatgt
aaggaaggcgacgtcgtcgaacgtaaatcaaagaaaaatcgaattttctatggttgtagt
cgctatcctgaatgtgaatttgtgacgtgggataaacccgtaggacgagattgtccaaaa
tgtaatcattatttagtagagtcgaaaaaaggacgcagttcgcaagtcgtttgctctaac
tgtgattataaagaagaagtacaaaaataa
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