Siniperca chuatsi (mandarin fish): 122861485
Help
Entry
122861485 CDS
T08948
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 2
KO
K16355
leucine-rich repeat and fibronectin type-III domain-containing protein 2
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
schu04515
]
122861485
04990 Domain-containing proteins not elsewhere classified [BR:
schu04990
]
122861485
Cell adhesion molecules [BR:
schu04515
]
Immunoglobulin superfamily
SALM family
122861485
Domain-containing proteins not elsewhere classified [BR:
schu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
122861485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
ig
LRR_1
fn3
Ig_2
LRR_9
LRRCT
Ig_C17orf99
Sp38
GP79
Ig_DSCAM-DSCAML_C
Motif
Other DBs
NCBI-GeneID:
122861485
NCBI-ProteinID:
XP_044021879
LinkDB
All DBs
Position
LG15:7006916..7135432
Genome browser
AA seq
788 aa
AA seq
DB search
MDKVVISLLLLGTAVMMVHACPKYCVCQNLSESLGTLCPSKGLLFVPPDIDRRTVELRLG
GNFILKITTQDFANMTGLVDLTLSRNTISAIQPFSFIDLETLRSLHLDSNRLTELGPDDL
RGLVNLQHLILNNNQMSRISKATFDDLLLTLEDLDLSYNNLRSVPWEAIRKMINLHQMSL
DHNLISFIAEGTFTDLDKLARLDLTSNRLQKLPPDPIFARSQSSILMSTPYAPPLSLSFG
GNPLHCNCEVLWLRRLEREDDMETCASPASVKGRYFWSVREEEFVCEPPLITQHTHKLLV
LEGQTASLRCKAVGDPMPTVHWVAPDDRLISNSSRATVYENGTLDITITTSKDYGTFTCI
AANAAGESTASIELSIIQLPHLSNGTNRTTQSKSGLSDITSSTKISKGEPKPMPEKVVSV
SEVTAVSALVKWTVSKSTPKVKMYQLQYNCSEDEVLIYRMIPMTNRAFVVTNLVPGMQYD
LCVLAIWDDTATTLTATNIVGCVQFITREDYPQCQSLHSGFLGGTMILVIGGIIVATLLV
FIIILMVRYKVTSGIQTNKMPTVSNTYSQTNGGLNRFNGAPPQVKSTVVVMREEMVEFKC
GSLQSSLSSSSSSSNSLDSQTGRGAGDRYSMQGSECSTLPSSKFRRHGHSAKARPNLDHL
LGAFTSLELRGVARDHQGASGPSTTSNAMMTVAMAPPSDKEPLLGRAESTTMLGRLLGLP
QEGKPKRSHSFDMGHVGATQCRSSYPRRISNIWTKRSLSVNGMLLQYDDSEDEKPTFESS
EWVMESTV
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggacaaagtggtcatcagtctcctgcttctgggaaccgcagttatgatggtccatgca
tgtcccaaatactgtgtctgccagaacctctcagagtctttggggactctgtgcccctcc
aaaggcttgctctttgtcccaccggacatcgaccggcgaactgtggagctccggctgggc
ggcaacttcattctcaagatcaccactcaggactttgccaacatgacaggtctggtagat
cttaccttgtcccgcaacaccatcagcgccatacagcctttctctttcattgacctggag
accctgagatccctgcacctcgacagtaaccggttgactgagctgggaccggacgacctc
cgagggcttgtcaacctgcagcacctcatcctcaacaacaatcagatgagtcggatctcc
aaagcaacctttgacgacttgttactgacactggaggatctggatttgtcatataacaac
ttgcgcagtgtgccttgggaagccatccgcaagatgatcaacctccatcagatgagtctg
gatcataaccttatctcttttattgccgaggggactttcacagatctggataaactggcc
cgattggacctcacctccaaccgtctccagaagctccctccggaccccatctttgcgcgc
tcccagagcagtatattgatgagcactccttatgcacctccactctctctcagctttggt
ggaaatccattgcactgcaactgtgaagtgctttggcttcgaaggctggagcgtgaggat
gatatggaaacctgcgcttctcctgctagtgtaaaggggcgctacttttggtctgtacgt
gaggaggagtttgtttgtgagccccccctaatcacgcaacatacacataagctactggtg
ctggaaggccaaacggctagcctgcgctgcaaagcagtcggtgatccgatgccaactgtg
cattgggttgctcctgatgaccgtttgatcagcaactcctcccgagcaacagtatacgaa
aatggcaccctggacattacaatcaccacatccaaggattacgggacctttacttgtata
gctgccaatgctgctggggaatctacagcctcgattgagctgtcaatcattcaactcccc
catctgagtaatggtacaaaccgtaccacacagtccaagtcggggctttcggacataact
agctctaccaagatcagtaaaggggagcctaaacctatgccagaaaaggtggtgtctgta
tcagaagtgaccgccgtctctgctctggtcaagtggactgttagcaaatcaactccaaag
gtcaaaatgtatcaacttcagtacaattgttcggaggatgaagtcctcatttacaggatg
attcccatgactaacagagctttcgtagtcacaaatcttgtcccagggatgcagtatgac
ctctgcgtcttggccatctgggatgacactgccaccacccttactgccaccaacattgtc
ggctgtgtccagttcatcaccagggaggactacccgcagtgccagtctcttcacagtggc
ttcctgggtggcaccatgatcctggtcattggtggcatcattgtggccacgctactggta
ttcatcatcatccttatggtgcggtataaggtgaccagtggcatccagactaataaaatg
cccaccgtgagcaacacatactcacagaccaatggggggttgaacaggttcaacggtgcc
ccaccacaagtcaaatccacagtggtggtcatgcgtgaggaaatggtagagttcaagtgt
ggatccctccagagcagtctctcttcatcctcatcctcttctaactcattagacagccaa
acaggaaggggggctggcgaccgctacagcatgcagggcagcgaatgcagcaccctgccc
agcagtaagttcaggaggcacgggcacagcgccaaagcacggccaaacctggatcacctt
ttaggggccttcacctcactggaactgcgaggggtagcgagggaccaccaaggggcttct
gggccctccaccacttccaatgccatgatgacggtggctatggcacccccgtccgataaa
gaacccctgctcgggagggctgagtccaccaccatgctgggacgtctcctagggctgccc
caggagggtaagcccaagaggagccactcgtttgacatgggtcatgtgggggccacacag
tgtcgcagcagctaccctcgcaggatcagtaacatctggactaagcgcagtctgtctgtt
aacggcatgctgctgcagtatgatgatagtgaggacgagaagcccacttttgagagctct
gagtgggtgatggaaagcacagtttga
DBGET
integrated database retrieval system
