Siniperca chuatsi (mandarin fish): 122861500
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Entry
122861500 CDS
T08948
Symbol
mnat1
Name
(RefSeq) CDK-activating kinase assembly factor MAT1 isoform X1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03022
Basal transcription factors
schu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122861500 (mnat1)
09124 Replication and repair
03420 Nucleotide excision repair
122861500 (mnat1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schu03021
]
122861500 (mnat1)
03400 DNA repair and recombination proteins [BR:
schu03400
]
122861500 (mnat1)
Transcription machinery [BR:
schu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
122861500 (mnat1)
DNA repair and recombination proteins [BR:
schu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
122861500 (mnat1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-RING_UBOX
zf-C3HC4
TRAF3_RING
zf-UDP
Xol-1_N
zf-RING_2
zf-P11
Motif
Other DBs
NCBI-GeneID:
122861500
NCBI-ProteinID:
XP_044021913
LinkDB
All DBs
Position
LG15:14736996..14770667
Genome browser
AA seq
311 aa
AA seq
DB search
MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCENCVEMLFVRGSGNCVQCDTPLRKSNFRV
QLFEDPTVDKEVEIRKKVLKIYNKRDVDFSSLREYNDYLEQVEDIVYNLTNNIDMENTKL
RMEQYQRENRDIIQKNKAKLTREQEELEELLLLEQQGNEQRRLDVLQEEQRQLQAKRKNK
QALLDELEQSQLPATILLAQHKVRAAQLETQIEQQKQAVKPTNLFSTGIHMRQTVSLQPV
PKMEEVLYHYKPLQVETYGPPVPELEQLGRLGYLNHVRAAMSQDTAGGYSSALACHRAIQ
DALSGLFPPKG
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggacgaccaggggtgtccgagatgcaaaacaaccaaatacaggaatccgtcgctgaag
ctgatggtgaacgtctgcggtcacacgctatgcgagaattgtgtggagatgctgtttgtg
cgcggctcaggtaactgcgtgcagtgcgacacacccctgaggaagagcaacttccgcgtg
cagctcttcgaagaccccactgtagataaggaggtggagattcgcaagaaggtgctgaag
atatacaacaagagagatgttgatttctccagcctgagagaatataacgactacctggag
caagtggaggacatagtgtataacctgacaaacaacattgatatggagaacaccaagctg
aggatggagcagtaccagagggagaacagagatatcatccagaagaataaggctaaactt
acgcgagagcaggaggagctggaggagctgctgttgctggagcagcagggcaatgagcag
cggaggttggatgtgctgcaggaggagcagaggcagctacaggccaagaggaagaacaag
caggctctactggatgaactggagcagtctcaacttcctgccaccatcttgcttgcccaa
cacaaggtccgtgctgcccagctagagacccagatagagcagcagaaacaggcagtcaaa
cctaccaatctattttcaactggaatccatatgcggcaaacggtgtctctccagcctgtt
cccaagatggaggaagttctgtaccactacaagccccttcaagttgaaacttacggaccc
ccagtgcctgaactggagcagctgggcagacttgggtatctgaaccacgtgcgggctgcc
atgtctcaggacacagctggaggatactcctcagctttggcatgtcatcgagccattcag
gatgcgctcagtgggctgttccctccgaaaggctaa
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integrated database retrieval system
