Siniperca chuatsi (mandarin fish): 122861645
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Entry
122861645 CDS
T08948
Symbol
gabrb1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-1 isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04080
Neuroactive ligand-receptor interaction
schu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122861645 (gabrb1)
04082 Neuroactive ligand signaling
122861645 (gabrb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
schu04040
]
122861645 (gabrb1)
Ion channels [BR:
schu04040
]
Ligand-gated channels
GABA-A
122861645 (gabrb1)
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
OAD_gamma
Motif
Other DBs
NCBI-GeneID:
122861645
NCBI-ProteinID:
XP_044022311
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Position
LG15:3523650..3614653
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AA seq
477 aa
AA seq
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MWTTLDCGCWGVCCLSLLATVVCGAQSASEPSNMSYVKATVDKLLKGYDIRLRPDFGGAP
VDVGMSIDIASIDMVSEVNMDYTITMYFQQSWRDKRLSYTGIPLNLTLDNRVADQLWVPD
TYFINDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIE
SYGYTTDDIEFYWQGGSNGGSVTGVENIELPQFSIIDYQTLSKKAVFATGSYPRLSLSFK
LKRNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLP
KIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGRGPHLQKKVAEKAAKSNNENKSRVE
SNKVQVDAHGNILLTNLTSEMGAADMMGALNDPRATMFSYDSASIQYRKPMTSRDLYRRP
AIERPMGHKGSLRRRATQLKVKIPDIMDVNAIDKWSRVVFPITFTFFNLVYWLYYVH
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtggactactctggactgcggatgctggggggtctgctgcttgtccctgctagcgact
gtagtctgcggggcgcaaagcgccagcgaacctagcaacatgtcatatgtgaaagccacc
gtggacaagctgttgaagggctatgacatccgtcttcggcctgattttggaggcgccccg
gtggatgttggcatgagcatagacatcgccagtattgacatggtgtcagaagtcaacatg
gactacaccatcaccatgtacttccagcagtcctggagagacaagcgtctctcatacaca
ggcattccgctcaacctcactctggacaaccgggtggcagaccagctatgggtccctgac
acctacttcattaatgacaagaagtccttcgtacacggggtgacagtgaagaaccggatg
attagactgcaccctgatggaaccgtgctctatggtctcaggatcaccacaacagctgcc
tgcatgatggacctgcgcagatacccactggatgagcagaactgcaccttagagattgag
agctatggttacaccactgatgacatcgagttctactggcagggaggaagcaatggaggc
tcagtcactggggtggagaacatcgaactgccccagttctccatcatagactaccaaacc
ctctccaagaaagctgtgtttgccacaggttcctatccacgtctgtccctgagctttaag
ctgaagaggaacattggctatttcatcctgcaaacctacatgccctccatcctgatcacc
atcctgtcctgggtctccttctggatcaattatgatgcctcagctgccagagtagcctta
ggtataaccacggtgctgaccatgaccaccatcaatacccaccttagggagactctaccc
aagatcccctacgtcaaggccattgacatttacctcatgggttgctttgtctttgtcttt
ctggccttgctggagtacgcctttgtcaactacatcttcttcggtcgaggtcctcacctg
cagaagaaggtggccgaaaaggctgcgaagtctaacaacgagaataagagcagagtggag
agcaacaaagtgcaggttgatgctcatggcaacatcctcctgaccaacctaacaagtgag
atgggtgcagcagacatgatgggcgctctaaacgaccctcgggctaccatgttctcttac
gacagcgccagcatacagtaccgcaagcccatgaccagccgagacctgtacagacggccg
gccattgaacgtccaatgggccacaagggcagcttgcggaggagggccacgcagctcaaa
gtcaagatccccgacatcatggatgtcaatgccatagacaaatggtcccgtgtcgtcttc
ccaatcacgttcaccttcttcaacctggtctactggctttactatgtccactag
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