Siniperca chuatsi (mandarin fish): 122861776
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Entry
122861776 CDS
T08948
Symbol
capn3a
Name
(RefSeq) calpain-3 isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122861776 (capn3a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
schu01002
]
122861776 (capn3a)
Enzymes [BR:
schu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
122861776 (capn3a)
Peptidases and inhibitors [BR:
schu01002
]
Cysteine peptidases
Family C2: calpain family
122861776 (capn3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
CAPN13-like_C_EFh
EF-hand_8
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
122861776
NCBI-ProteinID:
XP_044022585
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Position
LG15:23844921..23860812
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AA seq
724 aa
AA seq
DB search
MPYTPSGFFCDRLIRERERRDGEGTLNKPLRFNGQDYNALRQECLQRKTLFEDESFPATV
ESLGFKELGHKSNKVKNIVWKRPKEICENPQFIVGGASRTDICQGDLGDCWLLAAIACLT
LNEKLLYRVVPQEQSYSEGYGGIFHFQFWRYGDWVDVVIDDRIPTFNNQLVFTKSAERNE
FWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFYELKEAPKELYKIMKKALERG
SLMGCSIDSLVPARFETRTVTGLVKGHAYSVTAVEECKSSQHKDTKVRLVRLRNPWGQVE
WNGPWSDNSKEWATLSKTEKEKLQHQSAEDGEFWMSFEDFKKNYTKIEICNLTPDALEDD
KIHKWTVSVNEGRWVRGCSAGGCRNYPDTFWTNPQYRLRLMEEDDDPEDNEVCCTFVVAL
MQKNRRKERKMGANLFTIGFAIYEVPKEMHGNKQHMQKDFFLFTSSKARCKSYINLREVT
QRFRLTPGEYVIVPSTYEPHQEGEFILRVFSEKKNTSEEIENRIEADHPVPAPASAGEES
EEDQQFRTIFQEIAGDDMEITANELKNVLNRVITKHKDLNTEGFSLESCRSMIALMDVSF
MDGTGRLNLKEFRHLWNKIKQWQGIFKHYDADQSGIINSYEMRNAVNDAAMCLVSRSGFR
LNNQLYDIITLRYANENMNIDFDSFISCLVRLEAMFRVFQAFDQDGDGTIRLSVLEWLQL
TMYA
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgccctatacaccgtctggctttttctgtgaccggttgatccgggaacgagagaggaga
gacggggaagggactctgaacaagcccctccgctttaacggccaggactacaacgccctg
agacaggagtgccttcagaggaagaccctgtttgaggatgagtctttcccggccactgtg
gagtctttgggcttcaaggagctcggacacaagtccaacaaggtcaagaacatcgtctgg
aagaggcccaaggaaatctgtgagaaccctcagttcattgttggaggagccagtaggaca
gacatctgccagggagatcttggtgactgctggttgctggctgccatcgcctgtctcacc
ttgaatgagaagcttctctaccgtgttgttccccaggagcaaagctactcagagggctat
ggtggcatcttccacttccagttctggcgttatggcgactgggttgatgtcgtcattgac
gaccgcatcccaaccttcaacaaccagctggtcttcactaagtccgctgagaggaacgag
ttctggagcgccctacttgagaaggcctatgctaagctgcacggctcctacgaggccttg
aagggcggaaacaccactgaggccatggaggatttcactggtggggtcactgagttctat
gagttgaaggaagctcccaaagagctctataagatcatgaagaaagctctggagagaggc
tccctcatgggctgctccattgattccctggttcctgctcgctttgagactcgtaccgtg
acgggacttgtgaagggtcacgcctactctgtgacggcagtggaggagtgtaaatcgtct
cagcacaaggacactaaagttcgtctggtgcgtctcaggaacccgtggggtcaagtggaa
tggaacggcccctggagtgacaactctaaggagtgggctacactctctaagactgaaaaa
gagaagctgcagcaccagagtgccgaggatggagagttctggatgtcatttgaggacttc
aagaagaactacactaagattgagatctgtaacctcacccctgacgccctggaagacgat
aagattcacaagtggacggtttctgtgaacgagggtcgctgggtgagaggctgctctgct
gggggctgcaggaactacccagacactttctggaccaaccctcagtaccgccttcgtttg
atggaggaggatgatgatcccgaggacaacgaagtgtgctgcaccttcgtggtggctctg
atgcagaagaacaggcggaaagagcgcaagatgggagccaacctcttcaccatcggattc
gccatttatgaggtgccaaaggagatgcatgggaacaagcagcacatgcagaaggacttc
ttcctgttcacctcctccaaagctcgttgcaagtcctacattaacctgcgcgaggtgacc
cagcgtttccgcctgacccctggggagtacgtcatcgttccctcaacgtacgagccgcac
caggagggagagttcattctgcgagtcttctctgaaaagaagaatacctcagaggagata
gagaacaggatcgaggccgatcatccagtgccggcgccggcctcagcgggggaagagagc
gaggaggaccagcagttcaggactatttttcaggagatagccggcgatgacatggaaatc
acagccaacgaattgaaaaacgttctcaacagagtgatcaccaaacataaggacctgaac
actgagggcttcagcctggagagctgcaggagcatgattgctctgatggacgtatccttt
atggatgggacaggtagactcaatcttaaggagttcagacatctgtggaataagatcaaa
cagtggcagggaatctttaagcactatgatgctgaccagtccggtatcatcaacagttac
gagatgaggaatgctgtcaacgatgcagccatgtgtcttgtgtcccgctcaggcttccgt
ctcaacaaccagctgtacgacatcatcaccctgcgctacgcaaacgagaacatgaacatc
gacttcgacagcttcatcagctgtctggttcggctcgaagccatgttcagggtgttccag
gcctttgatcaggatggagatggtacaatcagactcagtgtcctggagtggctccagttg
accatgtacgcctag
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