Siniperca chuatsi (mandarin fish): 122861872
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Entry
122861872 CDS
T08948
Symbol
gabrg1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit gamma-1 isoform X1
KO
K05186
gamma-aminobutyric acid receptor subunit gamma
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04080
Neuroactive ligand-receptor interaction
schu04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122861872 (gabrg1)
04082 Neuroactive ligand signaling
122861872 (gabrg1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
schu04040
]
122861872 (gabrg1)
Ion channels [BR:
schu04040
]
Ligand-gated channels
GABA-A
122861872 (gabrg1)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
122861872
NCBI-ProteinID:
XP_044022821
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Position
LG15:complement(3407862..3461471)
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AA seq
461 aa
AA seq
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MKRVFVRALQDKAMNPWLLFALLGLCAAFGPSKQEEEDYEDVPINKTWVLSPKVYESDVT
LILNKLLQGYDNKLRPDIGVRPTVIETAVYVNSIGPVDPINMEYTIDIFFAQTWYDSRLK
FNSSMKLLMLNSNMVGKIWIPDTFFRNSRKSDAHWITTPNRLLRLWSNGRVMYTLRLTIN
AECYLKLHNFPMDEHSCPLEFSSYGYPKNEIMYRWQRRAVEVADQRYWRLYQFAFVGLRN
TSDVAHTQSGEYVIMTIFFDLSRRMGYFTIQTYIPCSMIVVLSWVSFWINKDAVPARTSL
GITTVLTMTTLSTISRKSLPKVSYVTAMDLFVSVCFIFTFAALMEYGTLHYFTSNRQTKK
AKANNNTQQKASSMMNIRPGTSLLQINNIVPYHEEGDYAYECLDGKDCASFFCCFDDCRS
GAWRENRMHVRVSKIDSYSRIFFPTAFGLFNLVYWIGYLYL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgggtttttgtcagagctctgcaggacaaagccatgaatccctggctgctcttc
gctctactcggactctgtgcagcatttgggcccagtaaacaggaagaagaggactatgaa
gatgttcccataaataagacctgggtcttatcaccgaaggtctatgaaagtgatgtgact
ttgatcctaaataaactgctgcagggctacgacaacaaactgcggcctgacatcggagta
aggccgacagtgattgaaacagccgtgtatgtcaacagcattggaccagtggaccccatc
aacatggaatacaccattgacatcttctttgcccagacatggtatgacagccgactgaag
ttcaacagctcgatgaagctgctcatgctcaacagtaacatggtaggcaaaatctggatt
cctgatacattcttcaggaattcccgcaaatcagacgcccactggatcaccactcccaac
cgcctcctgaggctgtggagcaatggaagagtcatgtacacactgaggttgactataaat
gcggagtgttaccttaagctgcataactttccaatggatgagcactcgtgtccactggag
ttttcaagctatggttatcccaagaatgagataatgtaccggtggcagagacgggcagtg
gaggtggcagaccagcggtactggaggctctaccagtttgcctttgtagggttgaggaac
acctctgatgtggcacacacccagtcaggggaatatgtaatcatgacaatcttttttgac
ctgagtcggagaatgggctacttcaccatccagacatacattccctgcagtatgatcgta
gtcttgtcctgggtctccttctggatcaacaaggatgccgtcccagcccgcacatctcta
ggtatcaccacagtgctcaccatgacaactctaagcaccatttccaggaagtccctgccc
aaggtttcctatgtcactgccatggacctgttcgtctctgtctgcttcatcttcaccttt
gctgcccttatggagtacggaactctgcactacttcaccagcaacagacagaccaaaaag
gctaaagccaacaataacacacagcagaaagcatccagcatgatgaatatccgacctggc
acgtccctactgcagattaacaacattgtgccctatcacgaggagggtgactatgcttac
gagtgtttggatggaaaggactgcgccagcttcttctgctgctttgatgactgtcgctca
ggtgcctggcgcgaaaacaggatgcacgtgcgggtttccaagattgattcttactcacga
atattcttccccactgcttttggccttttcaatctggtttattggataggttatctgtat
ctataa
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