Siniperca chuatsi (mandarin fish): 122861931
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Entry
122861931 CDS
T08948
Symbol
lrfn5a
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X1
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
schu04990
]
122861931 (lrfn5a)
Domain-containing proteins not elsewhere classified [BR:
schu04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
122861931 (lrfn5a)
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GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
LRR_5
LRR_1
ig
LRR_9
Ig_2
fn3
C2-set_2
DHU1_N
Rop
Motif
Other DBs
NCBI-GeneID:
122861931
NCBI-ProteinID:
XP_044022949
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Position
LG15:8759921..8883683
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AA seq
871 aa
AA seq
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MERLLLCVMLAVAMAVRAQICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRHTVELRLA
DNFVTSVKRKDFANMTRLVDLTLSRNTISFITPHAFTDLENLRALHLNSNRLTRIGNDTF
SGMSKLHHLILNNNQLVLIHQGAFNDLLALEELDLSYNNLDSIPWEAIQKMTSLHTLSLD
HNMLDFIPEGTFSLLQKLNRLDVTSNKLQKLPPDPLFQRAQVLATSGVLSSTSFALSFGG
NPLHCNCELLWLRRLNREDDLETCASPQHLSGRYFWSIPEEEFLCEPPLITRYSHEMRVL
EGQRVALRCKARGDPEPAIHWISPEGKLVSNSSRTLVYTNGTLDILISTVKDTGSFTCIS
SNPAGEAHQTVDLVIIKLPHISNNTNNIQEPDPGSSDISTSTRGGANGSNVTGDVKGGVD
KRVVTAEATSSTALIKFNFQRNIPGIRMFQIQYNGSQDDSLVYRMIPPSSKNFLVNNLAA
GTQYDLCVLAIYDDVITSLTATRVVGCVQFTTESEYMRCHFMQSQFLGGTMIIIIGGIIV
ASVLVFIIILMIRYKVCNHGEGGKGVSMSMTNVHSQTNGQQSQGCTVTPSASKHGSVGLD
DLSAGTKKRSGAVAGGGGGGGGKDTMTQSSESSLPDCSTATSVLSQPWAARSPTAGSEER
EKAGEERGQAGVSSPTTGSLTKPKRKPTASKPGSACSNTSAAPENLPSSSPRPPSSSSST
ASSALLPSSIPLENLNTNRNNSTALNQTPPPFAPSTFSSPLATPSPVPSMRFRETPILRR
APRASTSASVKYQTLPVEEGGRSRARRRYSLSEGGPKTHSSHQGGGGVPKLGRVMQNKRS
QSMSGMLLPKDGDGDSDKGRCDSDWILESTV
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggagaggctgttgctgtgtgtgatgctggcagttgccatggcagtgcgtgcacagatc
tgcccgaagcgctgcgtatgtcagatcctgtcacccaacctggcaaccctctgtgccaag
aaaggtctactgtttgtaccgccgaacattgataggcatacagtggagctacggctggct
gacaactttgtcacaagtgtgaagaggaaggattttgcaaacatgacacggctggtggac
ctaacattatccagaaacaccatctccttcatcacacctcatgcctttaccgatctggaa
aacctcagagctctacacctcaacagtaaccgactgacgaggataggcaatgatacattc
agtgggatgtcgaagcttcaccacctgattctgaacaacaaccagctggtgctgatccac
cagggagcattcaacgacctgctggcactggaagaattggacctcagttacaataacctg
gactctattccatgggaggccatccagaaaatgactagtctccatacgttgagtttagac
cacaacatgttggacttcattccagagggaacattttcactgctacagaaactcaaccgg
ctggacgtcacctctaataaacttcaaaagctgccaccagacccactttttcaacgggct
caggtcctggccacgtccggggtcctgagctccacttcttttgcattgtcattcggtggg
aaccctctgcactgtaactgtgagttactgtggctgcgaaggctgaacagagaggacgac
ctggaaacgtgcgcttcaccccaacacctctccggccgatacttctggtccatccctgaa
gaggagtttctctgcgaacctccactcatcaccagatactcccatgagatgagggtgctt
gaagggcaaagagttgcactcaggtgtaaggcaagaggtgacccagagccagccatccat
tggatctctccagagggcaaactggtgtctaactcctccagaacattggtctacaccaat
gggactctggacatcctcatcagtacagtgaaagacaccggctccttcacctgcatctcc
tccaaccctgccggtgaagcccaccaaacagtagacctggttattataaaactcccccac
atctccaacaacaccaacaacatccaggagcccgacccaggatcatcagacatttccacg
tcgacccgtggcggagccaatgggagcaacgtgacgggtgacgtgaagggcggggtggat
aaaagggtggtgacggctgaggccacgtcatcaacagcgcttatcaagttcaacttccag
aggaatattccaggcattaggatgttccagatacagtacaatgggagccaagatgactcg
ctggtttacagaatgatccccccatcaagcaagaacttcctggtcaacaacctggcagca
gggacccagtacgacctctgcgtgctggccatctatgatgatgtcatcacctctctgaca
gcgacacgtgtggtcggctgcgtgcagttcaccaccgagtctgagtacatgaggtgtcat
tttatgcagtctcagttccttggtgggactatgatcatcatcatcggagggataatagtg
gcctctgtgctcgttttcatcattatcctgatgatacggtacaaggtgtgtaaccatggt
gagggtggtaaaggcgtttcaatgtcaatgaccaacgttcactcacagaccaatgggcag
cagtcacagggatgcactgtgactcccagcgcctctaaacatggctcagtcggattagac
gacctctcagcaggcacgaagaaaaggagcggagcagtagcaggaggaggaggaggagga
gggggcaaggatacgatgactcagtcgtccgaatcttccctgcctgactgctccaccgct
acgtcagttctcagccagccttgggcagccagaagcccaacagctggatccgaggaacgg
gagaaagctggtgaagagagaggtcaagctggcgtctcgtcgcccaccaccggttcacta
actaagccgaagcggaagcccacggcgagtaagccgggctcggcttgctcgaacacctcg
gctgctcctgaaaatctcccctcctcctcccctcgccctccttcctcctcctcctccacc
gcctcctctgctctcctcccctcttccatccctctggagaacctcaacaccaaccgcaac
aactccaccgctctcaaccaaaccccacctcccttcgccccatccactttctccagccct
cttgccaccccgagccccgtcccctccatgcgatttagagagacgcccatcctgcgcagg
gctcctcgcgcctccacctctgcctccgtcaagtaccagactctccctgtggaggaggga
gggaggagcagggcgagaaggaggtactcactcagtgagggaggcccaaagactcactcg
tcccatcagggaggaggaggagtgcccaaattagggcgtgtaatgcagaacaaaaggagc
caatcgatgagtgggatgctgctcccgaaagacggggatggagactcggacaaagggcgg
tgcgattcggactggatcttagaaagcacagtttga
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