Siniperca chuatsi (mandarin fish): 122862092
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Entry
122862092 CDS
T08948
Name
(RefSeq) SLIT and NTRK-like protein 3
KO
K25834
SLIT and NTRK-like protein 3
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122862092
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_9
LRR_14
LRRCT
Motif
Other DBs
NCBI-GeneID:
122862092
NCBI-ProteinID:
XP_044023267
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Position
LG15:19705685..19722168
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AA seq
950 aa
AA seq
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MQWVALAVALGCVCLSRASHTPTPTPTSTHTPLVDNSEEEVDEPCFEPCTCEVKEGVLHV
HCDGRGFTNVSQVSQSWVRPFKLNLQRNSLRRLYSNGFQHLGNAVSINLGNNALQDIRVG
AFHGLAKLRRLYLHENKLEVFRNDTFAGLEALEYLQADYNVIKRIDSGALRFLYKLRVLI
LNDNLIPVLPAHLFRSVSLTHLDLRGNRLKSLAYAGTLEYVGRSLMELQLEENPWNCGCE
AVQLQQWLGQIPYTAVVGDVTCEYPFHLHGKDLREIPRKELCADLPDKELQAEGGGPSAG
SQPQHLPPNSKPNTQPGRVRPTKPSSMVHGSRQNTHTSSTSSSSSSAERKDRERPLRPTK
RPRPSRISPTPRSLMPNQNPPVAGYQTRPPIPIICPLGCTCNLHITDLGLTVNCKENAFL
NVSQLTPRPLNGRKLYLSGNLIQRIYRTDFWNFSSLDLLHLGNNRISYLQEGAFSSLTTL
RSLYLNGNNLERLSPHMFLGLQNLRYLYFEYNEIREVDPGTFDSMPSLQLLFLNANLLRS
LPLGVFSGVNLARLNLRNNHLLQLPMAGVLEHLTGLVQVDLQQNPWECNCEAAPLKRWLE
GLSAVVVMGEVVCHSPEKTKGVDLRSLSMELLCPEMEPQEDQEEQTATSTATDSGVSVGY
PSSGLGPLIPTGKDSIPLSVLVLSLLVLFVSAFFAAAALIAYALRRRDKLPFRRQGEVDL
AGIQMECGIFTEQTHHHHHHHHGLPETPPLPPLEHNHVYDTILPPEVASNGPDPAAASHM
CSNPIYKEEQDAAVTQRPQQQQTFTASKESEGGYCSAAEKEREWTLEVSSSPINTVTGAM
GPLAGLHGNGILCPTVIDSQGPTPKVELVDCLFRLPAPEFRDLPDRYARPPPRYPHPQDA
RPDQTLVVTTASSTAGGSNSSQSEQGAGEQRARLRTTPDYMEVLDRSYQF
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgggtcgctctggcagtggccctggggtgtgtgtgtctgtcccgggcatcgcac
acccccaccccaacccccacctccacacacacccctctagtggacaactcagaggaggaa
gtggacgagccgtgctttgagccgtgcacgtgcgaagtcaaagaaggcgtgctgcacgtg
cactgtgatgggcggggcttcactaatgtcagccaggtgtcacagtcgtgggtccgccct
ttcaaactcaacctccagaggaactctctgaggcgtctctatagcaacgggtttcagcac
cttggcaacgcagtgtcgataaaccttggcaacaatgcactccaggacatccgagtggga
gctttccacggtttggccaaactgagacgcctgtacctccacgagaacaagctggaggtc
ttcagaaatgataccttcgctggcttagaggctctggaatacctccaggctgactacaat
gtgatcaaacgaatcgacagcggtgctctgaggttcctctacaagctccgggttctcatc
ctcaacgacaacctgatccctgtcttgcctgctcatctgttcagatctgtgtctctgact
catctggacctgcggggaaaccgtctgaagagcctggcatatgctgggaccctggagtac
gttggtcgctctctgatggagctacagctggaggagaatccctggaactgtggctgcgag
gcagtgcagctacaacagtggctgggtcagatcccctacacggctgtagtcggggacgtt
acctgcgaatatcccttccaccttcacggcaaggacctgagggaaatcccccgcaaggaa
ctgtgtgctgacctgccggataaagagctacaagcagaggggggtggtccatcagcagga
tcacagccccaacatttgcccccaaactctaaacccaacacccagcctgggcgagtcagg
ccaactaaaccctcctccatggtccatggctcccgccagaatactcatacctcctccact
tcgtcgtcctcttcctcagccgagcgtaaagacagggaaaggcccctgaggcccactaaa
aggcctcgaccctccaggatatcccccacacctcgcagtctgatgcccaaccagaatccg
cccgtggctggctaccaaacacgaccccccatccccatcatttgtcccctgggctgtact
tgcaacctgcacatcacagacctgggcctgaccgtcaactgcaaagagaacgccttcctc
aatgtgtcccagctcacaccccggcctctcaacggccgcaagctgtacctaagtggaaac
ttaatccagaggatctaccgcacagacttctggaatttctccagccttgacctgcttcac
ctggggaacaaccgcatctcctacctccaggagggggccttctccagcctgacaaccctg
aggagcctttacctgaacgggaacaacctggagaggctcagcccccacatgttcctgggg
ctgcagaatctaaggtatctttattttgagtacaatgagatccgtgaggtagatcctggg
accttcgactccatgccgtctctccagctgttgttcctcaatgccaacctgctacggagc
ctccctctcggtgtgttttctggggttaatctggctcgtctcaatctaaggaacaaccac
cttcttcagcttcctatggcaggtgtgctggagcacctcaccggactggtacaggtggac
ctgcagcagaacccgtgggagtgcaactgtgaagcagctccgctgaagcgttggctggag
gggctcagcgcggtggtggtgatgggagaggtggtctgccattccccggaaaagaccaaa
ggcgtagacctccgctccctctccatggagctgctctgccctgagatggagccccaggag
gaccaggaggagcagacagccacctccacagccacagacagcggtgtatcggttggctac
cccagctcaggactggggccactgatccctacagggaaggattcaatccctctgtcggtg
ttagtgctcagcctgctggtgttgtttgtatcggcattcttcgcggcagcggcactaatc
gcctatgccctgaggaggagggacaagctgccgtttcgtcgccagggagaggtagacttg
gcaggcatccagatggagtgtggaatcttcaccgagcagacgcaccaccatcaccaccat
caccacggcctcccagagacgccacctctacctccgctcgaacacaaccacgtctacgac
accatcttgcccccagaggttgcgtcgaatggtcccgaccccgccgcagcctcacacatg
tgtagcaaccccatctacaaagaggagcaggatgcagcagtgacacagcgaccacagcag
cagcagacattcacagcttccaaagagagcgagggagggtactgctctgcagcagagaag
gagagggagtggactctggaagtgtcctcgtcacccatcaacactgttacaggagcaatg
gggccgctcgctggcctccatgggaacggcatcctctgccccacagtgatcgacagccag
ggccccacccctaaggtcgaactagtggactgcctcttcagactccctgcccccgagttc
agagacctgccagacaggtacgcaaggccgccgccccgctaccctcacccccaggatgcc
agacctgaccaaactctcgtggtcaccaccgccagctccacagcaggcggtagcaacagc
agccagagcgagcagggagcaggagagcagagagccagactgaggaccacgccagactac
atggaggtgctggaccgctcttaccagttttaa
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