KEGG   Siniperca chuatsi (mandarin fish): 122862123
Entry
122862123         CDS       T08948                                 
Symbol
wdr1
Name
(RefSeq) WD repeat-containing protein 1
  KO
K24736  WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
schu  Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:schu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:schu04990]
    122862123 (wdr1)
Domain-containing proteins not elsewhere classified [BR:schu04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   122862123 (wdr1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_EML WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st eIF2A Beta-prop_WDR35_TULP_N Beta-prop_TEP1_C Beta-prop_HPS5 Beta-prop_EIPR1 NBCH_WD40 Beta-prop_NUP159_NUP214 WDR90_beta-prop_4th Beta-prop_RIG_1st PROPPIN Beta-prop_SPT8 WD40_like PEP5_VPS11_N Beta-prop_SCAP Beta-prop_WDR11_1st WD40_RFWD3 DUF5711 Beta-prop_ELP1_1st Beta-prop_DCAF12 KNTC1_N WD_LRWD1 HPS3_N
Other DBs
NCBI-GeneID: 122862123
NCBI-ProteinID: XP_044023321
LinkDB
Position
LG2:24033997..24044839
AA seq 606 aa
MPFELRHVFASLPQMERGVAKVIGGDPKGNNFLYTNGKCVIIRNIENPAIADIYTEHAHP
VTVAKYAPSGFYIASGDASGKIRIWDTTQKEHLLKYEYTPISGKVKDIAWTEDSKRIAVV
GDGREKFGAVFLWDSGSSVGDVSGHAKLINSVDIRQKRPYRLATASDDTTGSFFEGPPFK
FKFTLRDHSQFVNCVRFSPDGSRFVTAGADGQIFVYDGANGEQVCSLGGEKAHKGGIYAV
SWSPDSSQLISASGDKTVKLWDVGAGTAVTTFNMGTDVTDQQLGCLWQKDHLLSISLSGY
INYLDKNNPDRPIRTIKGHGKSIQCLTVHKTEGRPYIYSGSHDGHINYWDAETGENDCFS
GKGHSNQVSKMVTDEANELVTCSMDDTLRYTNIDKKEYSASDVVKMDFQPKSVSVATGGL
SLAVCIGQIVLLKDKKKVFTLDNLGYEAEVGVIHPGGTTAAVGGADGKIHLYSIQGNTLK
DEGQTMEAKGPITDMAYSNDGAYLAVIDEKKVATVFTVADGYSVKNDFYGHHAKPVSLAW
SPDNEHFATGGMDMMVYIWTVGDADNRIKLPDSHRLHHVSGLAWVDEHTLVTTSHDASIK
QWTITY
NT seq 1821 nt   +upstreamnt  +downstreamnt
atgccgtttgaactgagacatgtatttgccagtctcccacagatggagaggggagttgca
aaagtgattggcggcgatcccaaaggcaacaacttcctgtataccaatgggaagtgtgtc
atcatcaggaacattgaaaacccggctatagcagacatttacaccgaacatgcccatccg
gttactgttgccaagtatgcccccagtggattctacattgcatctggagatgcatcagga
aagatccgtatctgggacaccacccagaaggagcacctgctcaagtacgagtacacccct
atttcagggaaggtcaaggacattgcgtggacagaggatagcaagaggattgctgttgtt
ggggacggacgagagaagtttggggcagtgttcctgtgggactctggctcatcagtgggg
gacgtttccggccacgccaaattaataaatagtgtagacataaggcagaaacgcccttac
cgccttgctactgcgagtgatgacaccactgggtccttctttgaggggcctcccttcaag
ttcaagttcacattacgtgaccacagccagtttgtcaactgtgttcgcttctctccagat
ggaagtcggtttgtcacagctggcgctgatggccagattttcgtctatgatggagcgaat
ggtgagcaagtttgctcactgggtggagaaaaggcccacaaaggaggaatctatgcggtc
agctggagccctgacagctcccaactgatctctgcctcaggggacaagaccgtgaaactc
tgggatgttggtgcaggtacagccgtcaccaccttcaacatgggcactgatgtgacagac
cagcagctgggctgcctgtggcagaaagaccacctcctcagcatctccttgtcaggatac
atcaactatctggacaagaacaaccctgaccgccccatacgcacaatcaagggtcacggc
aaatccatccagtgtttgaccgttcacaaaactgaagggcgaccatacatctactcgggg
agccacgatggacacatcaattactgggatgcagaaactggggagaacgactgcttctcg
gggaaaggccacagcaaccaggtgagcaagatggtgactgacgaagccaacgagctggtg
acgtgcagcatggatgacacactgcgctacaccaacatcgacaagaaggagtacagtgcc
tctgacgttgtgaagatggatttccagcctaaaagtgtgtcagtagcaacgggagggctg
tcgctggctgtgtgcattgggcagattgtcctgctgaaggataagaagaaagtcttcaca
ttggacaatctcggctatgaagcagaggttggagttatccaccctgggggcaccactgct
gcggtggggggagcagatgggaaaatccatctgtactccattcagggcaacactctgaag
gacgagggtcaaactatggaggctaaagggccgatcacagacatggcctactctaatgat
ggagcctatctggctgtcatagatgagaagaaagttgccacagtttttactgtggctgac
ggctactcggtcaaaaatgacttttacggacaccacgccaaaccagtgtctttggcctgg
tcacctgataatgagcactttgcgactggtgggatggacatgatggtgtatatctggacg
gttggtgatgcagacaacaggattaagctcccagactctcaccggttgcaccatgttagc
ggcctggcctgggtagatgagcatactctagtcactacctcccatgatgccagcatcaag
cagtggactattacatactga

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