Siniperca chuatsi (mandarin fish): 122862156
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Entry
122862156 CDS
T08948
Symbol
srsf5a
Name
(RefSeq) serine and arginine rich splicing factor 5a isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03040
Spliceosome
schu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122862156 (srsf5a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122862156 (srsf5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
schu03041
]
122862156 (srsf5a)
Spliceosome [BR:
schu03041
]
Common components
Common spliceosomal components
SR proteins
122862156 (srsf5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
RRM_5
CDC45
Nup35_RRM_2
RSRP
Motif
Other DBs
NCBI-GeneID:
122862156
NCBI-ProteinID:
XP_044023385
LinkDB
All DBs
Position
LG15:22844296..22851732
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AA seq
299 aa
AA seq
DB search
MSGCRVFIGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFDDHRDADDAVYELNGK
ELCSERVTIEHARSRRGRGGGPGMGRFGGGGGGGGGGGGGGGGGYRQSRSSGSRLDRYGP
PVRTDHRLIVENLSSRISWQDLKDLMRKAGEVTFVDAHRPNKNEGVVEFASRSDMKNAIS
KLDGTELNGRKLKIFEDSRSHSKSRSRSRSYSRSKSRSRSRNRSRSRSRSASRTPERRPS
GGGKAAGRSPSRSKSRSKSRSRSHSRSPAPAQNKQSRSRSRSRSRSRSRSRSASADSKH
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgagtggttgtcgtgtcttcattggccgcttgagcccgcatgccagagagagagatgtg
gagaagtttttcaagggatatggccggattcgggaaatcaacttgaagaatggatttggc
tttgtggaatttgatgaccacagagatgcagatgatgctgtgtacgagttgaatggcaaa
gaattgtgcagtgaaagggtcactatcgagcatgctcgttccagaagaggaagaggtggc
ggccccggaatgggccgtttcggcggtggcggcggcggtgggggtggtggcggcggcggt
ggcggcggcggctatcgccaatctcgcagcagtggatccagactggacaggtatggccct
cctgtgcggaccgaccacaggctcattgtagagaacctctcttcacggattagctggcag
gacctgaaagacctgatgagaaaagcaggtgaagttacctttgtggacgctcacagaccc
aacaaaaatgaaggagtggttgagtttgcatcccgcagtgacatgaagaatgccatctcc
aagctggatgggacagaactgaatggacgcaagctgaagatctttgaggacagcagaagt
cacagcaagagccgctcccgttcccgcagctactctcggtcaaagagtcgttccaggagc
cgcaaccgttccaggagccgctccaggtctgccagtcgcaccccagagaggaggccatcg
ggagggggcaaggccgccggcagatccccctccaggtccaagtctcgctccaagtcccgc
tccaggtctcactcacgctcacctgctcccgctcagaacaaacagtcccgctcccgttct
cgttcccgctctcggtcccgttcacgttcccgctccgcttcagcagacagcaaacactga
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