Siniperca chuatsi (mandarin fish): 122862170
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Entry
122862170 CDS
T08948
Symbol
vti1b
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1B
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
122862170 (vti1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122862170 (vti1b)
Membrane trafficking [BR:
schu04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
122862170 (vti1b)
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GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
DUF3958
Fusion_gly
Motif
Other DBs
NCBI-GeneID:
122862170
NCBI-ProteinID:
XP_044023410
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Position
LG15:23374298..23379384
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AA seq
227 aa
AA seq
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MSSEEFEKLHEIYRSLYDELKLMPERVLKSHGEERKRLVRIFDERQGEAEEVLQGMEEEL
RAAPSSHRNAMSTKLRLYRRDLGKLQRDMKNSAPGFGSSSQPVEGSHHGIYSSQNQQSTH
LQSQRALLLQGTESLNNASQSIERSQRIANETEHIGTDIIEELGEQREQLDRTRNRLVNT
GENLSRSRKILRAMARRLVTNKLLLGVIILMELAILGAVIYLKFFRR
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggaggaattcgagaagttgcacgaaatctacagatcactgtatgatgagctc
aagctaatgccagagagagttctgaaaagccacggagaggagaggaagaggttggtgagg
atcttcgatgagaggcagggggaggctgaggaagtgttacaaggaatggaagaagagctg
cgtgctgccccttcctcccaccgaaatgctatgagtacaaagctgcgcctgtaccgccgg
gatctgggcaagcttcagagagacatgaaaaactccgctcctggctttggttcttcttcc
cagccagtggaaggaagtcatcatggcatctattcgtcacaaaatcaacaaagtacacac
ctgcagtcccagagagccctgctcctccagggcacagagtctctgaacaatgccagccag
agtattgaacgaagtcagcgcatcgccaatgagacggagcacatcggcacagatatcatc
gaggagctgggagagcagagggaacagctggaccgcaccagaaacagattggtgaatact
ggagaaaacctcagtcgaagtaggaaaattcttcgtgccatggcacggcgactggtgacg
aacaagttgctgttaggtgtcatcattttaatggagttggccattctaggtgctgtgatt
tatctgaagttcttcagacgataa
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