Siniperca chuatsi (mandarin fish): 122862298
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Entry
122862298 CDS
T08948
Symbol
mlh3
Name
(RefSeq) DNA mismatch repair protein Mlh3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
122862298 (mlh3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
schu03400
]
122862298 (mlh3)
DNA repair and recombination proteins [BR:
schu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
122862298 (mlh3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_3
MutL_C
HATPase_c
DNA_mis_repair
WW
Motif
Other DBs
NCBI-GeneID:
122862298
NCBI-ProteinID:
XP_044023629
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Position
LG15:complement(13503483..13513144)
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AA seq
1221 aa
AA seq
DB search
MKTMIKCLPKEVQGKLRSGVAIPSLQQCVEELILNSIDAEATCVGVRVDMEAFKVQVIDN
GAGMNAEDIECVGNRYHTSKCSSVEDLDNLSWYGFRGEALASIVSLATLVEISSRTRSSV
KTHVKIFKDGKGMNVFEAEIARPSAGTTVVICNFFHNMPVRKKRINAVLEGERIRHRMEA
ISLMHPSVSFTLKNDCTGVMTVQLPKAKNTYHRFVQIHSLGRAQKLGEISYTHGQFEVIG
YVGMEGHYNNGLQYLYVNDRLLLKTRIHKLLNFLLRRISSSNQKNDSPEWQSATRSPKHK
RSQELHGVYIINIKCSYSEYDICLEPAKTLIEFKDWDGILLCIEEAVKAFLSRENLVAVL
SQDDLDYVSPKLFGTHNTDQEGHNSGNGAQATISASTLYCSIGMKLASASVHRKHKEDCL
SEDSVCQESGLKEWKEETEQLGQKKITANELETQHKECRDEPLCDLARLEPASNNNISEE
LTQELTFSEAGEGSQILCISSSVRQLETEKLELSKEREIRLNNTTPTSDATSLDSITQQI
LPDLNSIEQILPYGRGTGGHGKTLVSNRKISLSDPYIHESLQTQDLSKISKSVVQQQILA
QKCEERSFASKCKISLDAGQDRSCQKVYKDFAPVIPSKIPRIVTCQKLSLCKECGSLEEF
RRVYGKSDELKLPSPETHQKNNTRLLQTERFVLNSQNLLICQKDQQDGDATETQKEETRS
SLRSPPTLSVFNKLKPVSRQNRGKTSLAAKLCHLKQHRTDASKVLPHLSRTASQDNTCLS
SGNDGIQDSNNNKEHCDTALNPEPVPGCSTNPQLAESEEATTSGDWLHYYNTSVGKTVYV
NKVTGLSQYEDPPTEETQVCCTSDVTNMAVSVISEIGMEYRCYPFQVDLVLPFLPKSRTE
RVISSGLDDRDDNGESSSSLTSLYSKWNNPVFVRPPMVGVDISSGQADGLAVKIHNILFP
YRFSKAMIHSMKVIHQVDKKFLACLINTRDEEPVALTESKGNLLVLVDQHAAHERVRLEN
LVADSYEDDPDVPGERRLCSSTILPPLDISVTEEELRLLRSCQPHLRSLGLEVKFSQAAD
PHIFVGKVPLCFMEKESNELRRGRPSVIKPIVEEYLREQIELLCSTGRVRGSLPLTVLKV
LASLACHGAIKFNDSLSRDECYSLVASLSSCQLPFQCAHGRPSIAPLVDILHLDKDQKEL
QKPNLQKLRRMYKAWELYGNR
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccatgattaaatgtttgcctaaagaggttcaggggaaacttcgctctggtgtc
gctatcccctcacttcagcagtgcgtagaggagcttatcctaaacagcatcgatgccgaa
gcgacctgtgtgggagtcagggtggacatggaggcgtttaaagttcaggtaatcgacaac
ggtgctgggatgaacgctgaggatatagagtgcgtgggaaacagataccacacaagcaaa
tgcagctctgttgaagacctggacaacctcagttggtatggtttccgaggagaagccctg
gcaagtatagtttctctagccacacttgttgaaatctcatcccggaccagatcatcagtg
aaaactcacgtcaaaatcttcaaggatggcaagggcatgaatgtatttgaagcagagatt
gcacgaccctctgcagggacaactgttgtcatttgtaacttcttccacaacatgccagtc
cggaagaagaggatcaatgctgtcctggagggtgagagaatcagacacagaatggaggct
atttctctgatgcatccctccgtgtctttcaccctgaagaatgactgcacaggagttatg
acggtgcagcttcctaaagctaaaaacacctaccacaggtttgttcagatacacagcctc
gggcgagcacagaaacttggagaaatcagctacactcacggacagtttgaagtgatcggt
tacgttggcatggaaggccactacaacaacggcttacagtacctgtatgtaaatgacaga
ctgctcctgaaaacacggatacacaagctgctgaactttctcctacgcagaatcagcagt
tcaaatcagaaaaatgacagtccagagtggcagtctgccaccaggagtccaaagcacaaa
cgaagccaagagctgcatggagtatacatcatcaatattaaatgctcttactcagagtat
gacatatgtcttgagcctgccaaaactctaatagagttcaaagattgggatggcatattg
ctctgtatagaagaggcagtgaaagctttcctgagcagagagaacttggtggctgtactt
tctcaagatgatttggactatgtatctcccaaattgtttggcactcacaatacagaccaa
gaggggcacaacagtggcaatggtgcccaagcgactatcagtgcttcaacattatattgc
agtataggaatgaaactggcatctgcttctgttcatcgtaagcacaaagaggactgtcta
agtgaggacagtgtttgccaggagtctggtctgaaggagtggaaagaagagactgagcaa
ctggggcagaaaaagataactgcaaatgagttggaaactcaacacaaagaatgtagagat
gagccactgtgtgatctggctagactggaacctgcatctaataataacatttctgaagag
cttacacaggagctaacattcagtgaagctggggaaggctctcaaattttatgtatttca
agttcagtcagacaactagaaactgaaaaacttgaactttcaaaagaaagggagataaga
ttaaacaatactaccccaaccagtgatgcgacttcactagacagcatcactcaacaaatt
ctgccagatttaaacagtattgagcaaatattaccttatggcaggggtacaggaggacat
ggaaagactttagtaagtaacagaaagatcagtctgtcagatccatacattcatgaaagt
ctgcagacccaggacctgtccaaaatcagcaagtcagtagttcagcagcaaattttagca
cagaaatgtgaagagagatcctttgcatcaaaatgcaaaatctcactggatgcaggccaa
gacagatcttgtcagaaagtatacaaagactttgctcctgtcattccctcaaagattccc
agaattgtaacttgtcaaaagttgtctttatgtaaagagtgtggatctcttgaggagttt
agaagagtatatggtaaatctgatgaactgaaattaccctctccagagactcatcaaaag
aataatactagacttcttcagaccgaaagatttgttttgaattcccagaatttattgatt
tgccagaaagatcagcaggatggtgatgctacagaaacacaaaaagaagagacacggagc
agcctccgaagcccaccaaccctctcagttttcaacaagttaaaaccagtctcaaggcag
aatagaggcaaaacatctttggcagctaaactctgccatttgaaacaacacaggacagac
gcttcaaaagtattaccacacctgtccagaactgcctcacaggacaatacctgcctcagt
agtggtaatgatggcatccaagacagcaataacaacaaggaacactgtgacactgcactg
aatccagagcctgtccccggttgcagtacaaatcctcagctggctgagagtgaagaggcc
acaacatcaggtgactggcttcattactacaatacatctgtgggaaaaacagtttatgtc
aacaaagtgactgggctcagccaatatgaggacccacctactgaagaaacacaagtgtgc
tgtacatctgatgtcaccaatatggctgttagtgtcatctctgaaattgggatggaatac
agatgttacccatttcaggtggatctagtgttgcccttcctacctaaatccaggacagag
agagtgattagttcagggcttgatgacagagatgacaacggtgagagctccagctcactc
acctcattgtactcaaagtggaacaaccctgtctttgtccgacctccgatggttggtgtg
gacatatcaagtgggcaagctgacggactggcggtcaagatccacaacattctctttcca
taccgcttttctaaggccatgattcactcaatgaaggttattcatcaagtggataagaaa
tttcttgcatgtcttatcaatacaagagatgaagagcctgtggcactcactgaaagtaaa
ggaaaccttctggtgctggtggatcaacacgctgcacacgagagagttcgacttgaaaat
ctagttgcagactcctatgaggatgatccagatgtaccaggagagagacgtctgtgttca
tcaaccattttgccacctcttgatatcagtgtaacagaagaggagctaaggctacttagg
tcttgtcagccacatttgcggagtttgggtctggaagtgaagttctcacaggcagcggat
ccacatatctttgtaggaaaggtaccactgtgcttcatggaaaaggagagtaatgagctc
aggcgggggagaccatctgttatcaagcctattgttgaggagtatctccgagagcagatt
gagttactatgctcaactgggagagtgaggggatctctgcctctcactgtgctgaaggtg
ctagcctccctagcatgccatggtgccatcaaattcaatgacagcctgagtagagatgaa
tgctacagcttggtggcatccttgtcctcctgccagctgcccttccagtgtgcccatggt
cgtccatccattgctcccttagtcgacatcctccatttggacaaagaccagaaggaatta
cagaaacccaacctccaaaagctgagaagaatgtataaagcgtgggaactatatggaaat
agataa
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