Siniperca chuatsi (mandarin fish): 122862346
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Entry
122862346 CDS
T08948
Symbol
rtn1a
Name
(RefSeq) reticulon-1a isoform X1
KO
K20721
reticulon-1
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122862346 (rtn1a)
03036 Chromosome and associated proteins [BR:
schu03036
]
122862346 (rtn1a)
Membrane trafficking [BR:
schu04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
122862346 (rtn1a)
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122862346 (rtn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Reticulon
RHD_RETREG1-3
DUF4736
Motif
Other DBs
NCBI-GeneID:
122862346
NCBI-ProteinID:
XP_044023718
LinkDB
All DBs
Position
LG15:complement(14597603..14618321)
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AA seq
733 aa
AA seq
DB search
MSAQPGEELGSEGRWFGDDYERNGLFDNTPTRFDELREEFKPRGNEVAGDLDQQFHPFQD
EGKRPPVAMETASTDDPMSGLFRKPMNDDGDVYTSLLSNQSFTSGREASYLSDDLKPSKS
SSGSSALDHFSSDTYSFSSNTKMTSDLADDMPKSLFGSDKTESYNYMDISHGDERHDQHQ
GALHSLVDTGSTGCDSLGSYIDKNPGRDEYDEEEEENLGPALGSHSFPYVEEPSDEELSD
YRSYRNLGGTPQTASPVKITLTESQPPTAKTELQQQPPPVSVSERENVLSVGLQGVPTVT
LSEPEDDSPASTPNASPTQKEFPSHDVFKADTVKPAASKSIPSTKAGSREHDGSSAESGD
SEIELVSEEPPKASSNPFAQPPKSKGTFSQPNNPFDNPPVAKGGFGLSGNHAPPTAYSIL
REEREAELDSDLFIESASEESPKREQGFSGPKQEVSPPSPLVPSAVPPRSTAEAVPAEPL
ITEKAKTPVKTEEDCPSKPKPPTAAVPPEVRLERPHQDDMHTNEGKGDLGKPAASTFLVG
FNKQKAIDLLYWRNVKQSGAVFSSVLLLLFSLTQFSVVSVGAYLALAALSATISFRIYKS
VLQAVQKTDEGHPFKAYLEIEIALSQDQISKYADKILLYTNTCMKELRRLFLVQDLIDSL
KFAVLMWLLTYVGALFNGLTLLILAVVSMFTMPVVYEKHQAQIDQYVGLIRTQVNSVVGK
IQAKIPGAKRKEE
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctcagcccggtgaggagctaggctcggaagggaggtggtttggggatgactat
gagaggaacggcctgtttgataacacaccgacccggttcgacgagctacgtgaagaattt
aagccgagaggcaacgaggtggcgggcgacctggatcaacaatttcatcctttccaggac
gaggggaaaaggcctcccgttgctatggaaactgcatctacagatgatcccatgtctggc
ctgtttaggaagcctatgaatgacgatggggatgtgtacacttccctgttgtcaaatcag
agcttcacatcgggtcgagaagcctcctacctgtcggatgacctaaaaccctccaagtcc
tcctccggctcctctgccctggatcacttctccagcgacacctatagcttcagctccaac
accaagatgacttccgacctggctgacgacatgccaaaatctctgtttggctcagataaa
acagaatcctacaactacatggacatcagccacggggatgagcgccatgaccagcaccag
ggggctctgcacagcctggtggacacaggctcaactggttgtgactcattgggcagctac
atagataaaaaccctggaagagatgagtatgatgaggaggaagaggaaaacctaggtcca
gcactgggctcccactctttcccctacgtggaggagccatctgatgaagagctgtcagac
taccgctcctaccgaaacctgggtggcaccccgcagacggccagcccagtgaagatcacc
ttgaccgagtcccagcctccaactgccaagactgagttgcagcaacaaccccctccagtc
agtgtgtctgagcgtgaaaacgtcctcagtgtgggcttacagggggttcccactgtgacg
ctatcagagccagaggacgacagcccagcttccactcccaatgcttcaccaacacaaaaa
gaattcccttctcatgatgtgttcaaggctgacacagtgaagcctgcagcttccaaaagc
attccaagcacaaaggccggcagcagggagcatgatggcagcagcgcagagtctggagac
tcagagattgagctggtgtctgaagagcctccaaaggccagtagcaacccatttgcccag
ccgcctaaaagcaagggcactttcagccagcctaacaacccctttgacaatcccccagtc
gccaagggaggtttcggcctgtctggcaaccacgctccacccacagcctacagcattctg
agggaggagagagaggcagagcttgacagtgatctcttcattgagtctgcgtctgaagag
agcccaaagagagagcagggcttcagtggccccaaacaggaagtcagccctccctctccc
ctggttcccagtgccgtccctccccgcagtacggctgaggcggtgccagccgagcccctg
atcacagaaaaggccaagaccccagtgaaaacagaggaggattgcccgagcaagcccaag
ccccccactgctgccgtgcccccagaggtgcgattggagagaccccaccaggatgacatg
cacaccaatgagggcaaaggagacctaggaaaacccgctgcctcaaccttcctggtgggc
tttaataaacaaaaagcaattgacctgctctactggaggaatgtgaagcagtcgggggcc
gtgttcagcagcgtgcttctgctcctcttctccctgacccagttcagtgtggtcagcgtc
ggagcctacttagccctggcagccctctctgccaccatcagcttcaggatctacaagtct
gtgctgcaggctgtgcagaagaccgacgagggacatcctttcaaagcctacctggagatt
gaaatcgctctatcccaagaccagattagtaaatatgccgacaaaatcctgctgtacacc
aacacctgtatgaaggagctccgcaggctcttcctcgtacaagatctgatcgactctttg
aagtttgctgttttgatgtggctgctgacctatgtgggtgctctgttcaacggcctgaca
ctgctcattctagctgtggtctccatgttcaccatgcctgtggtctatgagaaacatcag
gcacagattgatcaatatgtgggactaatacggacccaggtcaactctgtggtggggaag
atccaagcgaagatccccggggccaagaggaaggaggagtag
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