Siniperca chuatsi (mandarin fish): 122862604
Help
Entry
122862604 CDS
T08948
Symbol
hbs1l
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122862604 (hbs1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schu03019
]
122862604 (hbs1l)
Messenger RNA biogenesis [BR:
schu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
122862604 (hbs1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
122862604
NCBI-ProteinID:
XP_044023985
LinkDB
All DBs
Position
LG16:13577373..13597414
Genome browser
AA seq
703 aa
AA seq
DB search
MSRHRNVRGYNYDEDFDDDDMYGQSVDDDYCCISPATANQFIYSRQERQVPKEEPLGEGE
YEDEDVPMSPTISHNLDPLDQAKLYSCLDHMRTVLGDAVPDSVLTQAAIKCGFDPQRALD
AVLSEDTKTAPVTRSTSEKTASVAGVNQEKAPLPQRAKQEAVAEKAKSRDVSHNKLDSEV
VPKVARMTVSGKKQTMGFDVPSTGENGVVTASVRRGGSPENAVATLASDTTSRRPETPSK
GSNGDEPSTVPTPGRSSGKARQVINIKAELEKRQGGKPLLNLVVIGHVDAGKSTLMGHLL
YLLGNVNKRTMHKYEQESKKAGKASFAYAWVLDETGEERDRGVTMDVGMTKFETNSKVVT
LMDAPGHKDFIPNMITGAAQADVAVLVVDASRGEFEAGFEAGGQTREHALLVRSLGVTQL
AVAVNKMDQVNWQQERFQEIISKLGHFLKQAGFKESDVFYIPTSGLSGENLATRSSVSHL
TSWFSGPSLLEQIDAFKAPQRSVDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDRIL
AMPPNETCTVKGITLHDEALDWAAAGDHVSLTVTGMDIIKINVGCVFCEPKEPIRVCTRF
RARILLFNIEVPITQGFPILLHYQTVSEPATIRKLISVLHKSSGEVLKKKPKCLSKGMNA
IVEIQTQRPVSLELYKDYKELGRFMLRYVGSTIAAGVVTEIKE
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggcacagaaatgttcgaggttacaactacgatgaagactttgacgatgatgac
atgtatggacagtctgtggatgatgactactgctgtatatcaccggcaacagcgaatcag
ttcatctactcacgtcaagagaggcaagtaccaaaggaggagcctttaggagagggagaa
tatgaagatgaggatgtacccatgtcccctactatcagccacaacctcgaccctcttgat
caagccaagctgtattcctgtctggaccatatgcggactgtgctgggagatgcagtgcca
gactcggtcctgacccaggcagccataaaatgtgggttcgacccacagagggcactggat
gcagtcttgtctgaagacactaagacagccccagtgaccagaagtaccagtgaaaagact
gcttcggtagcaggagttaaccaggagaaagccccacttccacaaagagccaaacaagag
gctgtggctgagaaagctaaaagcagagatgtgtctcacaataaactggattctgaagta
gtacccaaagtggcccgcatgaccgtctctggcaagaagcagaccatgggcttcgatgtt
cccagcacaggggaaaatggcgttgtcactgcttcagtacgccgaggtggcagccctgaa
aatgctgtcgcaacccttgcctcagacaccacgtccagacgtcctgagactccatccaaa
gggtcaaatggagacgagccctccacagttcccaccccaggccgttcctctggaaaggcc
cggcaggtgatcaatatcaaggctgaactggagaagaggcaggggggcaaacctctgtta
aatttggtggttataggtcatgtggatgcaggtaaaagcacactgatgggccacctgctt
tatctgctggggaacgtcaacaagcgcaccatgcacaagtatgagcaggaatcaaagaag
gcgggaaaagcctccttcgcatatgcttgggtcctggatgaaactggcgaggagagggac
agaggtgtgacaatggatgtgggcatgaccaagtttgagacgaactctaaggtggtgacc
ctaatggatgctccaggacacaaagacttcatccccaacatgatcacaggagctgcacag
gccgacgtggcggtgcttgtggtggatgctagccgaggagagtttgaggcaggcttcgag
gcgggcggtcagaccagagagcatgccctgttggtgcgttcgcttggcgttactcagctg
gctgtagctgtcaacaagatggaccaggtaaactggcaacaagagcgtttccaagaaata
atttccaaacttggccattttctcaagcaggcaggattcaaggagtctgatgtattctac
atccccaccagtggcctgtcaggagagaacctcgctaccaggagttcagtgtcacatctt
acctcttggttctctggtcccagccttctggagcagattgatgccttcaaagcccctcag
aggtctgtagacaaacctttcaggctgtgcgtctcagatgtgttcaaagaccagggttca
ggcttctgtgttacagggaagatcgaggctggttatattcagaccggagacagaatactg
gctatgcctcccaatgaaacctgcactgtcaaaggtattactctacacgatgaggcgctg
gactgggctgcagccggagaccatgtcagcctgacggtcaccggcatggacatcatcaag
atcaatgtgggctgcgtgttctgtgagcccaaggagcctattcgagtctgtactcgattc
agagcccgaatccttctcttcaatatcgaggtccccatcacacaaggcttcccaattttg
ctgcattaccaaacagtcagtgagccggccaccattaggaaactgataagcgttctacac
aagagcagcggtgaggtcctcaagaagaaaccaaagtgtttgagtaagggtatgaatgcc
atcgtggagatccagacccagaggccggtgtcattagagctgtacaaggattacaaggaa
ctgggccgcttcatgctgcgatatgtcggctccaccattgctgcaggggttgtcactgag
atcaaagaataa
DBGET
integrated database retrieval system
