Siniperca chuatsi (mandarin fish): 122862628
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Entry
122862628 CDS
T08948
Name
(RefSeq) LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1B-like
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122862628
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122862628
03021 Transcription machinery [BR:
schu03021
]
122862628
03036 Chromosome and associated proteins [BR:
schu03036
]
122862628
Transcription factors [BR:
schu03000
]
Eukaryotic type
Helix-turn-helix
ARID
122862628
Transcription machinery [BR:
schu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
122862628
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
122862628
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
122862628
NCBI-ProteinID:
XP_044024056
LinkDB
All DBs
Position
LG16:27772483..27816701
Genome browser
AA seq
2268 aa
AA seq
DB search
MSNVDGADPSPDPSPAPGNRDRTAGGESRDKRPGSGSNVTDMETGMLGGHKVKPLGSSGG
AAGNIGPPPPPPPPPSSSSSSHHTPPPLRQFVQQQQHHQQTHNTITNHRIQQGRGEPRGA
SRGDRHHHGGAENILQVGNSRAVERHHQHQLNNSEEEEEEEEEERMDASLGSATNTTTTS
TNNNNPPPTGTSSEFNHYYGNGRGGPCFDQHGGQQSPGSGVRAAHSVHNAMDQVQNSHDG
YSNSSPYNHYPNYRPGYGSSGYGGMMSPSRQGNSLMGPGSGSSAAANHSKAAMTATSAPA
GGGVGGGGGGGGNNGGFQRFPGQGQQQQQQLHPSGATPTLNQLLTSPSTMMRGYGGGYPD
YNSPSAQQQQSMGLAKDVGSQYGSAAHGWGGQQRNHPSMSPGNNGQGSGRPQVPPSDPMA
MKRSQLYGMSANPYSQQQQGAPYSGQPYGALSPHRYPMGMASRGQMGMAGMQYPQQQMGS
QYSQQQQQQQQSVGGYCQPGQPPYFSPPQQQPAAPSQPPYMQPRPLPQQEVPQEAYGGRG
QSAAMTPGKPNHEEMSLSQQERPSSLPDLSGSIDDLPTGTEAAVSSGASGSGSTQGDQGT
PTRSPFSPHVSPRLPPPARSGPSPSPSPSPAGSSSQSRSGPLSPATSGPGSQMTPQVSGP
GSDVGPHPSAMTQDRGFPPSMQCSTQGPQFGPQQSAPPMSPHPAPGGPMHHGSYQQGGSY
GQYGPPGNYPRPPHYGGAPSANYCGPGPGPGLANSLGLNASSPMHGQGPSTPAGRGPGPG
PGGRPYPAGGSTMAPTSPGMPQPAGQGMGPPGPNASRKLPEVGPNAGPSANSSSTSAAAA
QGRPPFTCSPAFHSQSWPGGRPALSPTLHPSHPPPPPHPAHHSQQETYAQPQPTVQTAPE
HYGQGSYLGMAPMGGMGPGGSGGPGGPYSQQPGSNSGRMTPQGPPYNAPSSGPMMMPAEG
MGAHPDAKQRVELSKEGVCPASEPPKPKDGYSSQCVSKPPTPSPMSPRSASLSSCHGEDT
DSVSSPAWPKTSTSPKPSVATMTSEKITRLYEMGSEPERRPWVDRYLSFMEERGTPVPNL
PAVGKKPLDLCRLYLAVREIGGLAMVNKNKKWRELSSQLNVGTSSSSASSLKKQYIQYLF
AYECKVERGEEPPPEALGPAGDTKKPPSLQAKIQPPSPANSGSLQGPNTPQSSSSSLTEA
PGDLKPPTPASTPHSQMGPQPGNRNMGGVSVQDPFSEGSDPAFNNKRGQGPGGPPYQQAG
GPTDPSMRMQYDANKDPYGGPRKGPGPGEAFGPGQMPSGAMQDMYPRGPPSGPLTGMGPR
PQYPYGPGYERRPDHVMGPEGGMAPPGGQNSMGPSGNEAGMYPAGRFPHQRHGHDGYGQQ
YPHSMAYTSHQPLYPQQQGYKRPMEGLYPPAKRHEGEAFVQQFGSQQPDMFGPYGGGGGG
GYMGPERRPVQGQYPYPYARDRQGPPQHGMMGSGPPPVSGGPGEGPQANMWHPRTDMGYT
YNRQGQGPPYPGMGRGVDQEGRAPQDSQWPPSHPGQRQPPYPPHSSSSSSSSPSMPXLPS
RQPPSSFQATPTAPNHVTRSHSPSSFPGPWGSLSPTAPLPALYEEAGTPRPPPAQGLHLI
HREVSFPGSVEAXPKLKPRRRLTAKDTGTPEAWRVMMSLKSGLLAESTWALDTINILLYD
DSTVGSFSLTQLPGFLELIVEYYRRCLIQIFGILEEYEVGAEGQRTLLGPLSHPPEEEEE
ALKEVLKEPPAAATEPQEEQRIPRRSADEKEATSPLLAAAPAVNAAEEVKDGKPVVKEEV
EVKEEQQEQAEPRPQQASKYDKLPIRVEKGETWEEVEERWAELSRPNGFDSGLLHWKAGG
GDSTAHIQTGDSAPTNPAARQRRGEGRSQERGGGGDRQEEAEGGVEKSLPAGEGTPPETQ
EGSPSEVGGQRSPARSPISQLEDEPRCWDEAPLSTAESWQDSLAKRCLCVSNIVRALSFV
PGNDADMSRHPGLVLILGRLVLLHHHHPRRKRTPPSYQQEEEQGLACSRDEWWWDCLGAL
RENTLVTLANMSGQLDLSLYPESICLPVLDGLLHWMVCPSAEAQDPFSSAGGFSSLTPQR
LVLECLCKLSIQDCNVDLLLATPPFSRQQKLYATLVRLVGERKSQVCREMAVAVLSNLAQ
GDPTAARAVALVKGSVGTLIGFLEDSVAVAQYQQSSHSVLHAAAPPEPPSINMMCRAAKA
LLAMARVEENRAEFVLYESRLLDISLSAALNSSVAAIMCEVLFKIGRS
NT seq
6807 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgtagatggagcggatccgagtccggatccgagcccggctccggggaacaga
gaccgcaccgctggaggagagagccgggataaaaggccggggtccggctctaatgtgacc
gacatggaaacggggatgctcggcgggcataaagtgaaacccctcggcagcagcggcgga
gctgctggtaatattggacctcctcctcctcctcctcctcctccatcatcatcatcatca
tcccaccacacacctccgccgctccgccagtttgtccagcagcagcagcaccaccagcaa
acccacaacaccatcacaaaccaccgcatccagcagggccggggggagccgcggggagcg
agccgcggggaccgacatcaccatggaggggcagaaaacatcctccaggtggggaacagc
cgagcggtggagcgccatcaccaacaccagctgaataacagcgaggaggaggaggaggag
gaggaggaggagcggatggatgccagcctgggatcagccaccaacaccaccaccaccagc
accaacaacaacaaccctcctccgactgggaccagctctgagtttaatcattattatggg
aatggaagaggagggccttgctttgatcaacatggcggacaacaaagcccagggtctggg
gtaagagcggcgcactcggttcacaacgccatggatcaggttcagaactcccacgacggg
tacagcaacagcagcccgtataaccactacccgaactaccgacccggctacgggagcagt
ggctacggaggcatgatgagtccctcgcggcaggggaacagcctgatgggcccgggcagc
ggcagctcggccgctgctaaccacagcaaagcggctatgactgctaccagcgccccggcc
ggaggtggagttggcggcggcggcggcggcggcggcaacaacggaggatttcagcggttc
cccgggcagggtcagcagcagcagcagcagctgcacccgtccggagccacgccgactttg
aatcagttattgacgtctccgagcaccatgatgcgaggctacggaggtggatatccagat
tataacagcccttccgcgcaacagcagcagagcatggggctggctaaagacgtgggctcc
cagtacggctcggctgctcatggctggggaggacaacaaagaaatcacccgagcatgagc
ccggggaacaacgggcagggcagcggcagaccccaggtgccgccctcggacccgatggcg
atgaagcgctctcagctctacggtatgagcgccaacccgtactcccagcagcagcagggg
gcgccctactctggccagccctacggcgccctgtccccccacagatacccgatgggaatg
gccagcagagggcagatgggcatggctgggatgcagtaccctcagcaacagatgggatct
cagtacagtcagcagcagcagcagcagcagcagagcgtgggcggttactgtcagccgggt
cagccgccgtacttcagccctccacagcagcagcccgccgccccgagccagccgccgtac
atgcagccccgcccactgccgcaacaggaggtgccgcaggaggcgtacggggggcggggc
cagtctgctgctatgactcctgggaaaccaaaccacgaggagatgagcctgagccaacag
gagcggccgtccagcctgccggatttgtccggctccatcgatgacctgcccaccggcacc
gaggcagcggtgagttcaggggcgtcgggctccggcagcactcagggcgaccaggggacc
ccgacccgttctcctttctccccccacgtctcacctcgactccccccgccagcgcgcagc
gggccctccccctcgccctcgccgtcccccgctgggtccagcagccagtcgcgatctgga
cctctgtcccctgccaccagcggaccaggctctcagatgacccctcaggtctctggtcct
ggatccgatgtcggtcctcatccctctgccatgactcaggacagaggtttccctccctcc
atgcagtgtagcactcaggggcctcagtttggcccccagcagtcagcaccacccatgtcc
cctcacccagccccggggggacccatgcaccacggctcctaccagcagggcggctcctat
ggccagtacgggcccccaggtaactaccctcggcccccccactatggcggggcccccagt
gccaactactgcggccctggcccggggcccggcttagccaacagcctggggttgaatgcc
agcagtcccatgcacggtcaaggcccgtccaccccagcaggtcgcggccccgggcctggc
cccggggggcggccttaccccgccggagggagcaccatggcccccacctcccccggcatg
ccacagcccgcggggcagggcatggggcctccggggcccaacgccagccgcaaactgcct
gaggtcggccccaacgccgggccgagtgccaactcctcctccacctctgccgcagccgct
cagggcaggcctcccttcacttgttccccagccttccacagccagtcctggcccgggggt
cgacctgccctctctcctacccttcacccctctcaccctcctcctcctcctcaccctgct
caccactcccagcaggaaacctatgctcagccccaacccaccgtgcagaccgcccctgag
cattatgggcagggaagctacctgggcatggcaccaatgggaggaatgggccccggaggc
tccggaggtcctggaggtccctacagccagcaaccaggcagtaactctgggaggatgacg
ccgcagggacccccctacaacgccccatcctcaggtcccatgatgatgccagcagagggg
atgggtgctcacccagacgccaagcagagggttgagctcagcaaagagggcgtctgccct
gccagcgaaccacccaaacccaaggacggctacagctctcagtgtgtgtccaagcccccc
accccctcccccatgtccccccgctcagctagtctgtcctcctgtcacggggaggacacc
gatagcgttagcagccccgcctggcccaagacgtcaaccagccccaagcccagcgtggcc
accatgaccagcgagaagatcactcggctctatgagatgggctctgagccggagaggagg
ccgtgggtggaccggtacctgtctttcatggaggagagggggacgcccgtcccgaacctg
cccgccgtgggaaagaagcctctggacctctgcagactctacctggctgtccgagagatc
ggaggcctggccatggtgaacaagaataagaagtggagggagttgtcgtcccagttgaac
gtggggacgtccagcagctcggccagctctctgaagaagcagtacatccagtacctgttc
gcctacgagtgcaaggtggagcgtggagaggagcctccacctgaggccctggggcctgcc
ggagacaccaagaaacctccgtcactccaggccaagatccagccaccctccccagccaac
tcgggctccctgcagggccccaacacccctcagtccagcagcagctccctgaccgaggcc
cccggagacctgaagcccccgacccccgcctccaccccgcacagccagatgggccctcag
cccggaaacaggaacatggggggagtgagcgtccaggacccgttctctgaaggcagcgat
ccagccttcaacaacaagcgaggccagggacccggtggccccccctaccagcaggcagga
ggcccgacagacccctcaatgaggatgcagtacgatgccaacaaagacccatacggagga
ccgaggaaaggtccagggcccggtgaggcctttggtcccggtcagatgcccagcggcgcc
atgcaggacatgtacccccgcgggccgccctctgggcccctgacggggatgggccccaga
ccccagtacccctacggccccggctacgagcggaggccggaccatgtaatggggccagaa
ggaggcatggcgccccccggagggcagaacagcatgggtccgtctggaaacgaggccggc
atgtaccccgccggcagattcccccaccagaggcacggacatgatggttacgggcagcag
tatcctcacagcatggcctacacttcccatcagcccctgtaccctcagcagcagggttac
aagcgtccgatggagggtctgtatccgcctgcgaagcgtcacgaaggcgaagcgtttgtt
cagcagttcggctctcagcagcccgacatgttcggcccctacggcggcggaggagggggg
ggctacatgggccccgagcggcgtcccgtccagggccagtacccgtatccgtacgcccgg
gaccgccaggggcccccgcagcacggcatgatgggctcaggaccgcctccggtgtctggg
ggccccggggaggggccgcaggccaacatgtggcaccccaggacagacatgggctacacg
tacaaccggcagggccaggggcccccctaccccggcatgggccgaggagttgaccaggag
ggcagggccccccaggacagccagtggccccccagtcatccaggccaacgccagccaccg
taccccccccactcctcttcctcctcctcctcctctccttccatgcccnccctgccctcc
agacagcccccctcctcctttcaggccacgcccaccgcccctaaccacgtgacccgctct
cacagcccctcctccttccccggcccctggggttctctgtccccaacagcgcccctacct
gccctctatgaagaagccgggaccccacggcccccgcccgctcagggcctccacctcatc
cacagagaggtcagcttccccggctctgtggaggccnaccccaaactgaagccacgacgc
cggctcaccgccaaggacacaggaaccccggaggcgtggcgagtgatgatgtcacttaag
tccggcctattagcagagagcacctgggctctggacaccatcaacatcctgctgtatgac
gacagcactgtgggctccttcagcctcacgcagcttcctggtttcctggagctcatcgtg
gagtattaccgccgctgcctcatccagatcttcggcatcctggaggagtacgaggtggga
gccgagggccagaggaccctgctgggacccctgtcccaccctcccgaggaggaggaggag
gcgctgaaggaggtgctgaaggagccgccggctgccgccaccgaacctcaggaggagcag
aggataccgaggaggtcagcggacgagaaggaggcgacatcccccctgctcgcggctgca
cccgctgtcaacgccgcggaggaggtgaaagacggtaaacctgtggtcaaagaggaggtg
gaggtgaaggaggagcagcaggagcaggcggagccccgtccccaacaggccagcaagtac
gacaagctgccaatcagggtggagaagggggagacgtgggaggaggtggaggagcgctgg
gccgagctcagccgccccaacggcttcgacagcggcctcctgcactggaaggccggagga
ggagactccaccgctcacatccagacgggagactccgcccccacaaacccagcggcgagg
cagaggaggggggaggggaggagtcaggagagagggggaggaggtgacaggcaggaggag
gcagagggaggtgtggagaagagcctgccagccggtgaggggacgccacctgaaacacaa
gaaggctctccgtccgaggtcggaggtcagaggtcaccggctcggagtcccatcagccag
ctggaggacgagccccgctgctgggacgaggctccgctgtccacggccgagtcctggcag
gactctctggccaagcgctgcctctgcgtctccaacatcgtgcgcgccctctccttcgtc
cccggcaacgacgccgacatgtcgcggcaccccggcctggtgctgatcctgggccggctg
gtgctgctgcaccaccaccacccccgcaggaaacggacgccgcccagctaccagcaggag
gaggagcagggtctggcctgcagccgggacgagtggtggtgggactgcctgggcgcgctc
agggagaacaccctggtgacgctcgccaacatgtcgggccagctggacctgtcgctgtac
cccgagagcatctgcctgcccgtcctggacgggctgctgcactggatggtgtgcccgtcc
gccgaggcccaggacccgttctcctcggcgggcggcttctcctcgctcacgcctcagaga
ctggtgctggagtgtctgtgcaagctgagcatccaggactgcaacgtggacctgctgctc
gccacgccgcccttcagccgccagcagaagctctacgccacgctggtgcgcctcgtgggc
gagaggaagagccaggtgtgtcgggagatggcggtggccgtcctgtcaaacctggcgcag
ggcgaccccacggcggcgcgcgccgtcgccctcgtgaagggcagcgtgggaactctgatc
ggcttcctggaggacagcgtggccgtggcgcagtaccagcagagctcgcacagcgtgctg
cacgccgcggcgccgccggagccgcccagcatcaacatgatgtgccgcgccgccaaggcg
ctgctggccatggcgagggtggaggagaaccgggcggagttcgttctgtacgagagccgg
ctgctggacatctcgctgtcggccgccctcaactcctcggtggcggccatcatgtgtgaa
gtactgttcaaaatcggccgctcgtga
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integrated database retrieval system
