Siniperca chuatsi (mandarin fish): 122862752
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Entry
122862752 CDS
T08948
Name
(RefSeq) poly(A) polymerase type 3-like
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122862752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schu03019
]
122862752
Enzymes [BR:
schu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
122862752
Messenger RNA biogenesis [BR:
schu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
122862752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
DYH2-5-8_CC
Motif
Other DBs
NCBI-GeneID:
122862752
NCBI-ProteinID:
XP_044024323
LinkDB
All DBs
Position
LG16:complement(9338786..9351713)
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AA seq
682 aa
AA seq
DB search
MSGPIKSQAPPFPDIPKWYGVTGPISEDLPEEADLIQTRKLIDTLKSYGVFENDLELHHR
EKVVKRLESLYKEWLKEICEIMNLPETITENVGGKIFPFGSYHLGVHSKGADIDALCVGP
GFLERKDFFTSFFEKLKAQEEVKDIRAIKEAFVPVIKLTFDGIEIDLVFARVALKSIPEN
LDLLNDNLLKNIDKRCVRSLNGYRVTEEILRLVPNIHNFRLALRAIKLWAKRRNIYSNIM
GFLGGVSWAILVARICQAYPNATVSTLVTKFFKVFSMWVWPIPILLKRVEDRYFNLPVWD
PRVNPSDRCHLMPIITPAYPQQNTTFNVSPSTLTIIMEEIQRGRDITEEIQQKKADWSKL
FETPNIFEKYKHYILLQATSATEKQQLEWVGLVESKIRLLVGTLERNVHISLAHVNLQSF
PGSRRANDKGGMSTIWLIGLNMEESKNMKIDLTSDLLSFTDTIYTLAESCKIYEVGMTLS
ATHVKRENLSWQMPNGERKRVFSPETKPTVSRPISATVPPCHTPPVSSGQLATKRKGWPH
SEMPAKKIRADMESVSVTNGSSVKATTLSNPASPMTPQATKRHRSPQSETSLKKFKVNEE
PTPGTKDTCSSTGASFSKRPSPSASSPSTKRPGTSEPERPTKKFKSDLSWPTIELSDLPP
GPTKTAVVVKRAIKFHLISRRK
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtccaattaagagccaagctccaccattcccagacatccccaagtggtatggg
gtcactggtcctatcagcgaggatctgcccgaagaggctgacttgatccagaccagaaaa
ctgattgacactctgaagtcatatggtgtatttgagaatgacttggagctgcatcacaga
gagaaggttgtcaaacgactggagtcactctataaggagtggctcaaagaaatctgtgaa
ataatgaacttacctgaaacgataacagagaacgtcggaggcaagatcttcccatttggc
tcctatcatctgggagttcactcaaaaggtgctgatattgatgccctctgtgtcggaccc
ggatttcttgagagaaaagacttcttcacctccttcttcgagaagctgaaggctcaggag
gaggtcaaagacatacgggccattaaagaggcgtttgtgcctgtcatcaaactgaccttt
gatgggattgagattgacttagtctttgcccgggtggcactgaagagcattcctgagaat
ctggaccttctcaacgacaacttattgaagaacatagataaacgctgtgtcaggagtctc
aatggctacagagttacagaggagatcctcaggcttgtgccaaacattcataacttcagg
ctcgctttgagagccatcaagctgtgggccaaacggcgtaacatttactccaacattatg
ggcttcttgggcggtgtatcatgggccatactggtagccagaatttgtcaggcataccca
aatgctacagtgtccaccctggtgaccaaattcttcaaggtcttctcaatgtgggtgtgg
ccaatcccaattctcttgaagagagtagaggaccgctacttcaaccttcctgtttgggat
cccagggttaatccaagtgaccgctgccacctaatgccgatcatcaccccagcatatccg
cagcagaacaccacatttaacgtgtctccctccaccttaaccatcataatggaggagatc
caacggggccgtgacatcactgaagaaatacagcagaaaaaagcagactggtccaaacta
tttgaaacaccgaacatttttgaaaagtacaagcattacattctgctgcaagcaacttca
gctacggagaagcagcagcttgaatgggttggcctggtggagtctaaaatcagacttctc
gtgggaactctggagagaaatgtgcacatttccctggcccatgttaatctgcagtccttc
cctggatccaggagggccaatgacaaagggggaatgagcacaatatggctgattggactt
aatatggaggaatccaaaaacatgaaaatagacctgacctctgacctcctatccttcact
gacactatctacaccctggcagagagctgtaaaatatatgaagtggggatgaccttatca
gccacgcatgtgaagagggaaaaccttagctggcagatgcctaatggcgaacggaagagg
gttttcagtccagaaacaaagccaacagtgagccgcccaatctctgccacagtaccacct
tgccacacaccacctgtcagctcaggccaactggccacaaagagaaaaggctggcctcac
tctgagatgccagccaagaaaatcagagctgacatggaatcagtgtctgtgacaaacggc
tcatctgttaaagcgaccacgctcagtaatcccgcttcacccatgactccacaggccaca
aagagacatcgttctccccaatcagaaacttcactaaagaagttcaaagttaatgaggaa
ccaactccagggacaaaagacacctgctcctctacaggtgcctcgttcagtaagcgtccg
tctcccagtgcaagctcaccaagcaccaagagacctggcacttctgagccagaaaggccg
accaagaaattcaaatctgacctgagttggcccactatcgagctatccgacttacctccc
ggccccaccaagactgctgttgttgtgaaacgcgccatcaaattccatcttatcagcagg
cgtaagtga
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