Siniperca chuatsi (mandarin fish): 122862790
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Entry
122862790 CDS
T08948
Name
(RefSeq) flap endonuclease GEN homolog 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
schu03400
]
122862790
DNA repair and recombination proteins [BR:
schu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
122862790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Motif
Other DBs
NCBI-GeneID:
122862790
NCBI-ProteinID:
XP_044024405
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All DBs
Position
LG16:complement(17170624..17178366)
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AA seq
964 aa
AA seq
DB search
MVNELERGPTAPLFENSGLWCCFVLFSTDVFYSFSFVKSVKTHFGVVMGVHDLWSIVEPV
RESVPLYSLSGKTLAVDLSLWVCEAQHVQAMMGRVTKPHLRNLFFRVSSLTLMGVKLVFV
MEGEAPKLKAETMSKRTETRRGGFKKAPASKSNVTTNTSRGRFKAVLRECSEMLDYLGVP
WVTAAGEAEAMCAYLDSQGLVDGCITNDGDAFLYGARTVYRNFNMNSKDPQVDCYRTSRV
QTQLHLSRENLVGLAILLGCDYIPKGIPGVGKEQALRLIQMLKGQTMLQRFIQWKEENAD
VSEGVVKKVAHCLVCRHPGSAKAHERGGCVLCDSKHFCQPHDFDYQCPCDWHRYEQTRLA
VSFEANIRKKTLASQQFPFTEIIREFLISKDKPVSHFKRRQPNMLLMQKFAYDKMEWPKH
YTSEKVLVLMTYTELMNRKYGREMSSQIKPVRILKPRVRNAVACFEIIWSTPEHYVFPED
QPAEDQHEVRTVEEESLFRWAYPEVVESYLRDKALAEENKTKRKKPKSKKEKQSQVSDSI
SDLLAQMTLQSSSNTQPQTLLPTISNTEEPDVVVLDTPVNHKQQRKSKEDHSSLSDCPNT
PLSHAESEALASPSVSAVINALQLSDIDWDALSFTSSPTPQSAVNHTTEPQLSKTTDSEV
KETESENTSSDVKEADSRSAPELCYTECPLRDRVLMRNTAKAIDQIEIHNDVVSKQLNYE
FASLKHIPSHNSQLNGQIPSKGSNDLTELSGKESAVNKKEPLTDKRQCATNKAETETHSS
KQQLRPTVQAQSKTKDKCNDSQKPPQKYKFVRTATSSSAVPPQRCHSDPGQSDKGRNLPQ
TTKKSVCMSMCLSSEESDAENQQFGPQRKAKIKPINKIKGSFLSDFPLKPVSGPKTTKQT
AKTYQLIPISTKSTCQDVSPANVDSDVPLQTPASPVAVLDSDDSVICSESPLPLAERLRL
KFLK
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atggtcaacgaattggaacgtggcccaacggcgccactgtttgaaaactccgggttgtgg
tgctgttttgtgttgtttagcactgacgttttctactcattttcttttgttaaatcagtt
aaaacccattttggggtagttatgggtgttcacgatttgtggtctatcgtcgagccggtt
cgtgagtcggtgccgctctacagtttgagcggaaagacgcttgcagttgacctgagttta
tgggtgtgcgaggcccagcatgtccaagcaatgatgggaagagttaccaagccgcacctg
aggaatttattttttagggtatcatccctcacgcttatgggggtgaagcttgtctttgtg
atggaaggagaagccccgaaacttaaagcagaaaccatgagcaagaggacagaaacaaga
cgtggaggattcaaaaaggcgcctgcctctaagtctaacgttacaacaaacaccagcaga
gggcgctttaaagctgtacttagagagtgttcagagatgttggactatctgggtgtgccg
tgggtgacagctgctggggaggctgaggccatgtgtgcctacctggactctcagggcctg
gtggacggctgcatcactaatgatggagacgcgttcttgtatggagcccggactgtctac
aggaacttcaatatgaacagtaaagaccctcaggtggactgttacaggacctccagggta
caaacacagttacatctctccagagagaatcttgtcggtctggccatcctccttggctgt
gattatattcctaaaggcataccaggtgttggtaaagagcaagctctgaggcttatccag
atgctgaaaggacaaacaatgctgcagaggttcatccagtggaaggaggagaatgcagat
gtgtctgagggagttgtgaagaaggttgctcactgtctcgtatgtcgacatcctggctca
gcgaaagcccatgaacgtggtggctgtgtgctttgcgacagtaaacatttctgtcaacct
cacgactttgactaccagtgtccctgtgactggcaccgctatgaacagacccgcctggct
gtgtcttttgaggcaaacatcaggaagaaaacactggcaagtcaacagttcccctttaca
gagatcattcgtgagttcctgatctccaaggataagcctgtgtcacatttcaagaggaga
cagccaaatatgctgttgatgcagaaatttgcctatgacaagatggagtggccgaagcac
tacaccagtgaaaaggttttagtcttgatgacctacacagagttgatgaacagaaaatat
ggaagagaaatgtcctcccaaatcaagcccgtcagaatattgaagccgagggtgaggaat
gccgtcgcttgcttcgaaatcatctggagcacaccagaacattatgtgtttcctgaggat
cagcctgcagaggatcaacatgaggtgaggacggtggaggaagagtctctcttccgttgg
gcctacccagaggtggtagagagctacctgagagacaaagctctggccgaagagaacaag
accaagaggaagaagccaaagagtaaaaaggagaagcaatctcaagtctcagatagtatt
tctgacctcttggctcagatgaccctacaaagttcctctaacactcaaccacaaacgctg
ctccctactatttcaaacacagaggaaccagacgtggtggttttggacactccagtgaac
cataaacagcagcggaagtcaaaagaagaccacagcagtctgagtgattgccccaatact
cctctgtctcatgcagaatcagaggcccttgcttcgccttctgtctctgctgttatcaac
gctttacagctgagtgatattgactgggatgctttgtccttcacgtcttctccaactcca
caatcagccgtaaaccacaccactgagccccagctaagcaaaaccacagacagtgaggtc
aaggaaacagagagcgaaaacacctcaagtgacgtcaaagaagcagactccagatctgct
ccagagttgtgctacacagagtgtcctctaagggacagggtgctcatgaggaacacagct
aaagctatagaccagatagagatacacaatgatgtggtctcaaaacaactaaactatgag
ttcgcttctctcaaacacattccttctcataactcacaactaaatggacagatccccagt
aaaggtagcaatgacttgactgaattgtcaggaaaagaatcagctgttaacaaaaaagaa
ccactcactgacaaaaggcagtgtgcaacaaataaggcagagacagaaactcacagttca
aagcagcaattgaggcctacagtacaagctcaaagtaagacaaaggacaaatgtaatgac
tcccaaaagcctcctcagaagtataaatttgtcagaacagccacttcatcatcggctgtc
ccaccacagaggtgccactctgacccaggtcaaagcgacaagggcaggaacctgccgcag
accaccaagaagagtgtatgtatgagcatgtgtttgtccagcgaggaaagcgatgcagag
aatcagcagtttggacctcaaagaaaagcaaagatcaagcctataaacaagatcaagggc
agcttcctttcagacttccccctgaaaccagtttctggacctaaaacaaccaaacaaaca
gcgaaaacgtatcaactaatacccatatcaacaaaaagcacatgccaggatgtctcacca
gctaatgtggatagtgatgtgccccttcagactccagcatcacctgtcgctgtgttagat
agtgatgattcagtgatttgtagtgagagtccgctgccactggcagagagactgagactg
aaattcctgaagtga
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