Siniperca chuatsi (mandarin fish): 122862844
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Entry
122862844 CDS
T08948
Symbol
brf1b
Name
(RefSeq) BRF1 RNA polymerase III transcription initiation factor subunit b
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schu03021
]
122862844 (brf1b)
Transcription machinery [BR:
schu03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
122862844 (brf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
Trypan_PARP
DUF1110
Zn_ribbon_tTFIIB
RB_B
Motif
Other DBs
NCBI-GeneID:
122862844
NCBI-ProteinID:
XP_044024573
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All DBs
Position
LG16:complement(28915662..28958084)
Genome browser
AA seq
702 aa
AA seq
DB search
MSSRVCRTCGGSDIDVDQARGSAVCTSCGSVLEDNIIVSEVQFVEGSGGVSSAVGQFVSA
DGPGKAPLLGSGFHTSVGKESRAQTLQGGKRQIQQLGSQLQLNQHCLDTAFNFFKMVVSK
HLTRGRKTEHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYILGKTFLLLARELCINAPA
IDPCLYIPRFAHMLEFGVKTHEVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARMH
KFRRTVKDVISVVKVCQTTLRKRLTEFEDTPTSQLTIDEFMRVDLEQECDPPSFIAAQHK
AKMQQLEQELARKLDDVEGEISCYKDEIEIELEKSRPKLRGIYAAYAKEIDPEDAEVLSS
TSEPEEPEVEDDELQAAAQHLTQDFLCQVIQEEEGRGKKTDGSEQEAGPENDGAGPQRQA
APLAVILGKLPSATSLGLQQTFDESETGEKPDDEQSESGELDLDGIDDQEIEKYILNDKE
VQVKTELWMKQNAEYLKEQKEKEERIKKEKEQGTYKEKPKKSKKKKEQIQASTAGEAIER
MLEKKKISSKINYDVLRDLNSRGTGSGGGSSPSRASSDTNVAAATRKRLNRRRKKTSDAN
RDLAANASIMGKRVRLLISSTSKKKKTTVQAENSVTMTTDTTTEAAAEATPDPEPDTSST
PAAPATVEEEEEEEEVEVEVEEECVSALQLTEDYGCEEEEVF
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgagctccagggtttgcaggacctgtggggggtcagatatagacgtggatcaggctcgg
ggcagcgccgtgtgcaccagctgtggttcagttctcgaggacaacatcatcgtctccgag
gttcagtttgtggagggaagtggaggagtttcatctgctgtgggacagtttgtctctgct
gacggtccaggtaaagctcctcttcttggttctggtttccacaccagtgttggtaaagag
tccagagcccagaccctacagggcggtaagcgtcagatccagcagctgggcagccagctg
cagttgaaccagcactgtttggacacggccttcaacttcttcaagatggttgtgagtaaa
cacctgacgcgaggacgcaagacggagcacgtcatcgcagcgtgcctctacctggtgtgt
cgcaccgaggggacgcctcacatgttgctggacctgagtgacctgctgcaggtgaacgtt
tacatcctgggaaaaaccttcctgctgttggctcgtgagctctgcatcaacgctcctgcc
attgatccttgcctgtacatccctcggtttgctcacatgttggagttcggggtgaagact
catgaggtttccatgacggctcttcgtctccttcagaggatgaagagggactggatgcac
acgggacgccgaccctccggactctgtggagcagcgctcctggtagcagctcggatgcat
aagtttcgtcgtacggtgaaggatgtgatcagtgtggttaaagtctgccagaccactctg
aggaagagattaacagagtttgaggacacgcccaccagtcagctgacaatcgacgagttc
atgagagtagatctggagcaggaatgtgatccaccctccttcatcgccgcacagcacaaa
gccaagatgcagcagctggaacaggagctggccaggaagctggatgacgttgaaggtgag
atcagctgttacaaagacgagattgagatcgagctggaaaagagccgacccaaactgaga
ggaatctacgccgcctacgccaaagaaattgatcccgaggacgcagaggttttgtcctcg
acctctgaaccggaggagccagaggtcgaagacgacgagctccaagccgccgctcaacac
ttgactcaggacttcctgtgtcaggtgatccaggaggaggaggggcggggcaagaagaca
gatggaagcgagcaggaggcggggccagaaaatgatggggcggggcctcagcgtcaggcc
gcccctctggccgtcatcctgggaaagctgccgagcgccaccagcctgggcctccagcag
accttcgacgagtcagagactggcgagaaaccagacgacgagcagtcggagagtggcgag
ctggacctggatggtatcgatgatcaagagattgaaaagtacatcctgaatgataaggag
gttcaggtgaagacggagctgtggatgaaacagaacgcagaatacctgaaagagcagaaa
gagaaagaagagaggataaaaaaagagaaagaacaggggacgtataaagagaagccgaag
aagtccaagaagaagaaggagcagatccaggcgtcgacggcgggcgaggcgatcgagagg
atgctggagaagaagaagatctccagtaagatcaactacgacgtgctcagagacctgaac
agcagagggacaggaagtggggggggcagcagtcccagcagagcctcctccgacactaac
gtcgccgctgccacacggaaacgactcaaccgccgccgcaagaagaccagcgatgctaac
cgcgatctcgctgctaacgctagcatcatggggaagagggtccgcctccttatatcctcc
acatcaaagaagaagaaaacaaccgtccaggcagaaaactctgtcaccatgacaacagat
acgacaacagaggctgcagctgaagcgactcctgaccctgaaccagacaccagctccacc
cctgctgctcctgccactgtggaggaggaggaggaggaagaggaggtggaggtggaggtg
gaggaggagtgtgtcagcgctctgcagctcacagaagattacggctgtgaggaggaggaa
gtcttttag
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