Siniperca chuatsi (mandarin fish): 122862853
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Entry
122862853 CDS
T08948
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM50-like isoform X1
KO
K12024
tripartite motif-containing protein 50/73/74
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
schu04121
]
122862853
Ubiquitin system [BR:
schu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122862853
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
Apolipoprotein
zf-RING_6
YwqH-like
Prefoldin
U-box
Alpha-2-MRAP_C
Fas1-AflB-like_hel
LMBR1
zf-Nse
Motif
Other DBs
NCBI-GeneID:
122862853
NCBI-ProteinID:
XP_044024589
LinkDB
All DBs
Position
LG16:complement(29049802..29065426)
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AA seq
497 aa
AA seq
DB search
MERRQSLEEQLRCPICLDIFTEPLMLQCGHSYCRCCVRSMTVDLLGQLQCPVCRCAVDGD
SPPPNVSLARIIEALQEVSVSGGAQLESCPQHHNPLSLYCEDERVVICGLCGSIGAHRGH
KITPVSSVYSHMKEDISCLMTEFQHHKRKLEDQICKMAYNKSRITNESDVLKWVVRKEFG
ELRRCLEVEEAGFMQQVETSAAVLISSLQNQTDQLNQNLNRLQEAQNTLHDLSNEGHLDF
IMKYGSIAPRFREIQELQQKEERIFSSLNFKPGFNHNDIKLTVWKRLHRKVLPAPEPLKL
DPQTAHPMLELHRGDTVVSCGALLRRLPDNPERFSYSYCVLANRGFSSGKHYWEVEVGNK
PKWRLGLIKGTTNRKAKLVKNPDSGVWLIGLKDGVYEAFTSPRVVLPVLCPPHRVGVFMD
YQGRGLTFYNSDSPDELCFIYSFRLEVQGKVYPLLDVCWHDRGDNKHPLVLPQPHREHLL
PQPHREHLLPQPQKPDK
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggagcgtcgccagagtctggaggagcagctcaggtgtcccatctgtctggacatcttt
actgaaccactgatgttacagtgtggacactcgtactgcaggtgttgtgtgcgctccatg
acagtggaccttctcggtcagctgcagtgtcctgtgtgtcgctgtgctgtagacggagac
agtcctcctcccaacgtcagtttggctcgaatcattgaggcgctgcaggaagtgagtgtt
tcaggtggagctcagctggagtcctgtcctcagcatcacaacccgctcagcctttactgt
gaggatgaacgagtggtgatctgtggcctctgtggaagcatcggtgctcaccgcggacac
aaaatcacacctgtgagctccgtctacagtcacatgaaggaggacatttcctgtcttatg
acagagtttcagcatcataaacgtaaactggaggatcagatctgtaaaatggcgtacaac
aaatccaggatcactaatgagtctgacgtgctgaagtgggtggtgaggaaggagtttggt
gaactgcgccgctgcctggaagtggaggaggcggggttcatgcagcaggtggagacatcg
gctgcagtcctcatctcgtccctccagaaccagacagaccagttaaaccagaacctgaac
cggctgcaggaggcccagaacaccctgcatgacctgagcaacgaggggcacctggacttc
atcatgaagtacggttcgatcgctccgaggttcagagagattcaggagctccagcagaag
gaggagagaatctttagctctctgaactttaaaccaggtttcaaccacaacgacattaaa
ctcaccgtttggaaaagattacaccgaaaagtcctgccagcaccagagccgttgaagctg
gatcctcaaactgctcacccgatgttggagctccatcgtggggacacagtggtgtcctgt
ggggccctgctgcggaggcttcctgataatccagagaggttcagttacagctactgtgtc
ctggccaaccgaggcttctcctctggcaaacactactgggaggtggaggtcggtaacaaa
cctaaatggcgtcttgggttgatcaaaggaacgaccaatcgtaaggctaagctggtgaag
aatccagatagtggagtgtggttgatcggactgaaagacggggtttatgaagccttcacg
tcacccagggtggtccttccggtgttgtgtcccccccaccgggtgggagtcttcatggac
taccagggcagaggtctgaccttctataacagcgacagtcctgacgagctgtgcttcatc
tacagcttcaggctggaggtccaggggaaagtctatcccctgctggacgtctgctggcat
gaccgaggagacaacaaacaccccctggtcctcccccagcctcacagggagcatctcctc
ccccagcctcacagggagcatctcctcccccagccccagaaacccgacaagtga
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