Siniperca chuatsi (mandarin fish): 122862908
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Entry
122862908 CDS
T08948
Symbol
ctr9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schu03021
]
122862908 (ctr9)
Transcription machinery [BR:
schu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
122862908 (ctr9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_14
TPR_16
TPR_8
TPR_CcmH_CycH
TPR_12
TPR_17
TPR_10
TPR_11
TPR_7
TPR_6
ARM_TT21_5th
TPR_Slam
ARM_TT21_4th
ANAPC3
TPR_EMC2
Motif
Other DBs
NCBI-GeneID:
122862908
NCBI-ProteinID:
XP_044024744
LinkDB
All DBs
Position
LG1:16506626..16516134
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AA seq
1173 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDAKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSTNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFGRALELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSTFVLPFFGLGQMYVYRRDKENA
AQCFEKVLKAYPNNYETMKILGSLYATSDDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNLGALHFRLGNLGEAKKYFLASLDR
AKAEGEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDSKNLYAANGIGAVLAHK
GYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLKKFYKYQNTEVL
LYLARALFKCGKLQECKQMLLKARHVAPSDTVLMFNVALVLQRLATLVLKDEKSNLKAVL
SAVKELELAHRYFSYLSKAGDKMRFDLALAASEARQCSDLLSQAQYHVARARKQDEEEKE
LRAKQEQERDLLRQQMLKEQEEKRSREVEEQKKLLEQRALYVEKTKNLLTFAEGSKEMAK
EKKKGGSGGGRRKKGGDMDEFVNDDSDEDLPLKKKKKRRGGSGSEQEEGEDGEKKSRKKR
RRPAKGGGDDDSDNEEGASRPKKQRKPKERKRIEKPQPERLPPSLKGKIKSKAIISSSDS
SSDEDGLKIAEDRHQRDSGSGSDDEGGHRKRIASDSESDGGRNRSGSEVDSPPRSAGSPR
RSAGSEDDDSGSDRPVKKRRVQRQSDSEQSDNESKRSRSGSDDESRPGSPVAASDRGSDR
GSEAGSDNEGSPRRSDNGSEPEGGSNNEDDDSD
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgaggctcaatcgagatccctttacgggacacagatgaggttatcgagctcgac
tttgaccagctgccagagggagatgaggttatcagtatcctaaagcaggaacatacacag
ctgcacatatggatcgctttggcgttggagtactacaagcaaggcaaaacagaggatttt
gtcaagcttttagaggcggctcgtattgatggaaacctcgactacagagaccacgagaag
gaccagatgacctgtctggacacattggcagcttactatgtccagcaagcacgtaaagag
aaaaacaaagatgccaagaaagagctcatcacgcaggccacgctgctctatactatggca
gacaagatcatcatgtatgatcagaaccatttgttgggaagagcctgtttctgcctgctg
gaaggagacaagatggaccaggccgatgctcaattccactttgtcctcaatcagtccacc
aacaacatccctgctttgcttggtaaggcctgcatctccttcaataaaaaggattacaga
ggagcgctggcatattacaaaaaggctctacgtacgaaccccggctgcccagctgaggta
aggctggggatgggccactgttttgtcaagctcaacaaactggagaaggctcgtttggct
tttggtcgagccttagagctgaattcaaagtgtgtgggagctcttgttggtttggcggtt
ttagagctcaacaacaaggaggcagattccatcaagaacggagtgcagctcctgtcgcgt
gcctacaccatcgaccccagcaaccccatggtgctcaaccacctcgccaaccacttcttc
ttcaaaaaggattacagtaaagtgcagcatctggccctccatgctttccataacacagag
gtcgaggccatgcaggccgagagctgctaccagttagctcgctcatttcatgtgcaggag
gactatgaccaagcgtttcagtattactaccaggccactcagtttgcctcgtctaccttt
gtgttgcccttctttggcctgggacagatgtatgtgtatcgaagggacaaggagaatgcg
gcacagtgcttcgaaaaggttttaaaggcctaccccaacaactacgaaactatgaaaatt
ctggggtctctctatgcaacatctgacgatcaggaaaagagagacattgccaaaggtcac
ttgaagaaggtaacagagcagtacccagatgatgtggaggcgtggatcgagctggctcag
atcctggagcagactgatattcaaggagcactgtctgcatacggcacagccacccgcatc
ctgcaggagaaggtgcaggctgacgttccccctgagatcctcaacaacctgggggctctt
cacttcagactgggcaaccttggagaggctaagaaatactttcttgcatctctcgaccgg
gccaaagctgagggagagcacgatgagcattactacaatgccatttctgttaccacctcc
tacaatttggcccgcctgtatgaggcaatgtgtgaattccatgaagctgagaaactctac
aaaaacatcctgagagagcatcctaactatgtggactgttatttgcgccttggagcgatg
gctcgtgacaaaggaaatttctacgaagcttctgactggttcaaagaggccttgcagatt
aatcaggatcacccggatgcctggtccctgatagggaaccttcacttggccaaacaggaa
tggggtccgggtcaaaagaagtttgagcgtattctgaagcagccgtccacacagaacgac
acctactccatgctggctctgggtaacgtgtggctgcagactctgcaccagcccaccaga
gaccgggaaaaggaaaaaagacaccaggatcgagccctggcaatatacaaacaagtcctg
cgaaatgactccaagaacctctatgctgccaatggcatcggtgccgtcctggcccataag
ggctacttcagagaggctcgtgacgtgtttgcgcaggtgagggaggccacagcagacatc
agtgacgtctggctaaatctggctcacatctatgtcgaacagaagcagtacatcagtgct
gtgcagatgtatgagaactgcctgaagaaattttacaaatatcagaacactgaggtactg
ctgtaccttgcaagggcgctcttcaaatgtgggaaactccaagagtgcaagcagatgctg
ctgaaggcccgtcacgtggcgcctagcgacacggtgctgatgttcaatgtggccctggtg
cttcagagactggccactcttgtgctgaaagatgagaagagcaacttgaaggctgtactc
agcgctgtcaaagaactcgaactggctcacaggtatttcagctacctcagcaaggctgga
gacaaaatgaggtttgatctcgctcttgccgcttctgaggccaggcagtgttcggacctg
ctaagtcaggctcagtaccatgtggcgagagccagaaagcaggatgaggaggagaaggag
cttcgggccaaacaagaacaggagagggatctgctgcgtcagcaaatgttaaaagaacag
gaggaaaagcgaagcagagaggtggaggaacagaagaagctcctggaacagagagctttg
tacgtggagaagaccaagaacctgctcaccttcgcagagggatcaaaggaaatggccaaa
gaaaagaagaagggaggcagcggtggaggacgtcgtaagaaaggaggtgacatggatgag
tttgtcaacgatgactctgacgaggacctgccactgaagaagaagaagaagagaaggggt
ggcagcggcagcgagcaggaggagggcgaggacggagagaagaagtcacgcaagaagagg
aggagacctgctaaaggaggaggagatgatgatagtgataatgaggaaggcgcttcacga
cccaagaagcagcgtaaacctaaagaacgcaagaggattgaaaagccccagcccgagcgt
ctgccaccgtctctcaaaggaaagatcaagtctaaggctatcatctcttcttctgactcc
tcttcagatgaggatggactgaaaatagctgaagacagacaccaaagagacagtggttca
ggatctgatgacgagggcggccacaggaagcgcattgcgtctgacagcgagtcagacgga
ggtaggaaccgctctggcagtgaggtggacagccctccacgctctgcaggcagccctcgg
cgctctgcaggctccgaggatgacgactctggcagcgaccgtccagtgaagaagaggagg
gtgcagcggcagtccgactcggagcagtcggacaacgagagcaagaggagtcggtcagga
tcagacgatgagtcccggcccggttcacccgtcgcagcgtccgaccgaggatcagacagg
ggatctgaagcaggatcagacaacgagggctccccacgccgttctgacaacggctctgaa
cctgaaggtggctccaacaacgaggatgatgacagcgattaa
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integrated database retrieval system