KEGG   Siniperca chuatsi (mandarin fish): 122862908
Entry
122862908         CDS       T08948                                 
Symbol
ctr9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
  KO
K15176  RNA polymerase-associated protein CTR9
Organism
schu  Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:schu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:schu03021]
    122862908 (ctr9)
Transcription machinery [BR:schu03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    PAF1 complex
     122862908 (ctr9)
SSDB
Motif
Pfam: TPR_1 TPR_2 TPR_19 TPR_14 TPR_16 TPR_8 TPR_CcmH_CycH TPR_12 TPR_17 TPR_10 TPR_11 TPR_7 TPR_6 ARM_TT21_5th TPR_Slam ARM_TT21_4th ANAPC3 TPR_EMC2
Other DBs
NCBI-GeneID: 122862908
NCBI-ProteinID: XP_044024744
LinkDB
Position
LG1:16506626..16516134
AA seq 1173 aa
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDAKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFHFVLNQSTNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFGRALELNSKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSTFVLPFFGLGQMYVYRRDKENA
AQCFEKVLKAYPNNYETMKILGSLYATSDDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNLGALHFRLGNLGEAKKYFLASLDR
AKAEGEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQPSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDSKNLYAANGIGAVLAHK
GYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLKKFYKYQNTEVL
LYLARALFKCGKLQECKQMLLKARHVAPSDTVLMFNVALVLQRLATLVLKDEKSNLKAVL
SAVKELELAHRYFSYLSKAGDKMRFDLALAASEARQCSDLLSQAQYHVARARKQDEEEKE
LRAKQEQERDLLRQQMLKEQEEKRSREVEEQKKLLEQRALYVEKTKNLLTFAEGSKEMAK
EKKKGGSGGGRRKKGGDMDEFVNDDSDEDLPLKKKKKRRGGSGSEQEEGEDGEKKSRKKR
RRPAKGGGDDDSDNEEGASRPKKQRKPKERKRIEKPQPERLPPSLKGKIKSKAIISSSDS
SSDEDGLKIAEDRHQRDSGSGSDDEGGHRKRIASDSESDGGRNRSGSEVDSPPRSAGSPR
RSAGSEDDDSGSDRPVKKRRVQRQSDSEQSDNESKRSRSGSDDESRPGSPVAASDRGSDR
GSEAGSDNEGSPRRSDNGSEPEGGSNNEDDDSD
NT seq 3522 nt   +upstreamnt  +downstreamnt
atgtctcgaggctcaatcgagatccctttacgggacacagatgaggttatcgagctcgac
tttgaccagctgccagagggagatgaggttatcagtatcctaaagcaggaacatacacag
ctgcacatatggatcgctttggcgttggagtactacaagcaaggcaaaacagaggatttt
gtcaagcttttagaggcggctcgtattgatggaaacctcgactacagagaccacgagaag
gaccagatgacctgtctggacacattggcagcttactatgtccagcaagcacgtaaagag
aaaaacaaagatgccaagaaagagctcatcacgcaggccacgctgctctatactatggca
gacaagatcatcatgtatgatcagaaccatttgttgggaagagcctgtttctgcctgctg
gaaggagacaagatggaccaggccgatgctcaattccactttgtcctcaatcagtccacc
aacaacatccctgctttgcttggtaaggcctgcatctccttcaataaaaaggattacaga
ggagcgctggcatattacaaaaaggctctacgtacgaaccccggctgcccagctgaggta
aggctggggatgggccactgttttgtcaagctcaacaaactggagaaggctcgtttggct
tttggtcgagccttagagctgaattcaaagtgtgtgggagctcttgttggtttggcggtt
ttagagctcaacaacaaggaggcagattccatcaagaacggagtgcagctcctgtcgcgt
gcctacaccatcgaccccagcaaccccatggtgctcaaccacctcgccaaccacttcttc
ttcaaaaaggattacagtaaagtgcagcatctggccctccatgctttccataacacagag
gtcgaggccatgcaggccgagagctgctaccagttagctcgctcatttcatgtgcaggag
gactatgaccaagcgtttcagtattactaccaggccactcagtttgcctcgtctaccttt
gtgttgcccttctttggcctgggacagatgtatgtgtatcgaagggacaaggagaatgcg
gcacagtgcttcgaaaaggttttaaaggcctaccccaacaactacgaaactatgaaaatt
ctggggtctctctatgcaacatctgacgatcaggaaaagagagacattgccaaaggtcac
ttgaagaaggtaacagagcagtacccagatgatgtggaggcgtggatcgagctggctcag
atcctggagcagactgatattcaaggagcactgtctgcatacggcacagccacccgcatc
ctgcaggagaaggtgcaggctgacgttccccctgagatcctcaacaacctgggggctctt
cacttcagactgggcaaccttggagaggctaagaaatactttcttgcatctctcgaccgg
gccaaagctgagggagagcacgatgagcattactacaatgccatttctgttaccacctcc
tacaatttggcccgcctgtatgaggcaatgtgtgaattccatgaagctgagaaactctac
aaaaacatcctgagagagcatcctaactatgtggactgttatttgcgccttggagcgatg
gctcgtgacaaaggaaatttctacgaagcttctgactggttcaaagaggccttgcagatt
aatcaggatcacccggatgcctggtccctgatagggaaccttcacttggccaaacaggaa
tggggtccgggtcaaaagaagtttgagcgtattctgaagcagccgtccacacagaacgac
acctactccatgctggctctgggtaacgtgtggctgcagactctgcaccagcccaccaga
gaccgggaaaaggaaaaaagacaccaggatcgagccctggcaatatacaaacaagtcctg
cgaaatgactccaagaacctctatgctgccaatggcatcggtgccgtcctggcccataag
ggctacttcagagaggctcgtgacgtgtttgcgcaggtgagggaggccacagcagacatc
agtgacgtctggctaaatctggctcacatctatgtcgaacagaagcagtacatcagtgct
gtgcagatgtatgagaactgcctgaagaaattttacaaatatcagaacactgaggtactg
ctgtaccttgcaagggcgctcttcaaatgtgggaaactccaagagtgcaagcagatgctg
ctgaaggcccgtcacgtggcgcctagcgacacggtgctgatgttcaatgtggccctggtg
cttcagagactggccactcttgtgctgaaagatgagaagagcaacttgaaggctgtactc
agcgctgtcaaagaactcgaactggctcacaggtatttcagctacctcagcaaggctgga
gacaaaatgaggtttgatctcgctcttgccgcttctgaggccaggcagtgttcggacctg
ctaagtcaggctcagtaccatgtggcgagagccagaaagcaggatgaggaggagaaggag
cttcgggccaaacaagaacaggagagggatctgctgcgtcagcaaatgttaaaagaacag
gaggaaaagcgaagcagagaggtggaggaacagaagaagctcctggaacagagagctttg
tacgtggagaagaccaagaacctgctcaccttcgcagagggatcaaaggaaatggccaaa
gaaaagaagaagggaggcagcggtggaggacgtcgtaagaaaggaggtgacatggatgag
tttgtcaacgatgactctgacgaggacctgccactgaagaagaagaagaagagaaggggt
ggcagcggcagcgagcaggaggagggcgaggacggagagaagaagtcacgcaagaagagg
aggagacctgctaaaggaggaggagatgatgatagtgataatgaggaaggcgcttcacga
cccaagaagcagcgtaaacctaaagaacgcaagaggattgaaaagccccagcccgagcgt
ctgccaccgtctctcaaaggaaagatcaagtctaaggctatcatctcttcttctgactcc
tcttcagatgaggatggactgaaaatagctgaagacagacaccaaagagacagtggttca
ggatctgatgacgagggcggccacaggaagcgcattgcgtctgacagcgagtcagacgga
ggtaggaaccgctctggcagtgaggtggacagccctccacgctctgcaggcagccctcgg
cgctctgcaggctccgaggatgacgactctggcagcgaccgtccagtgaagaagaggagg
gtgcagcggcagtccgactcggagcagtcggacaacgagagcaagaggagtcggtcagga
tcagacgatgagtcccggcccggttcacccgtcgcagcgtccgaccgaggatcagacagg
ggatctgaagcaggatcagacaacgagggctccccacgccgttctgacaacggctctgaa
cctgaaggtggctccaacaacgaggatgatgacagcgattaa

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