Siniperca chuatsi (mandarin fish): 122863122
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Entry
122863122 CDS
T08948
Name
(RefSeq) LOW QUALITY PROTEIN: interphotoreceptor matrix proteoglycan 1-like
KO
K19017
interphotoreceptor matrix proteoglycan 2
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
schu00536
]
122863122
Glycosaminoglycan binding proteins [BR:
schu00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
122863122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SEA
Cornifin
Motif
Other DBs
NCBI-GeneID:
122863122
NCBI-ProteinID:
XP_044025206
LinkDB
All DBs
Position
LG16:complement(26563851..26631750)
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AA seq
1684 aa
AA seq
DB search
MLWEFGLVLLFVLAPQAAGIKESGVRLDSGVQTEASGPVRLVELLKMSTQTAGSGFELDR
RRSKRSVFLHSGVRICPQETINEVLASHQAYYQLRVCQEAVWEAFRIFFDRIPGTAEYQK
WVHTCQHESLCISDLAKNFSSSEEHMSMIHRRMNRRRDGSPPSRVVTPAPKQKIPEIAGA
EAQTVAPSAASPTATTSTTILLSPVSASPTPALDQTQPAEEVEEQWGADLKDSELPNVVP
ENPVEQIVEFSIDLVDPGYRELLDDPDSPQYIDLAQHLQDQMQHVFDKLPGFKTIHVLGI
SETQDTDGLGGISVHYSLVFEINSPKINSENSETATGTPESSANSGLREIVAKALREEAS
LPVDLDSLNFEPGAILLPALTSTSSVEVVNESIEPDSHNEFEVFTDEPEVDKPRLVVPLT
PMEKENALVTLLDPTAVPDDETTAVTGGMAESSDHSPASEDITDESEAIFVSEPEPSNEE
GEEEELLIITHEIETIHHDETGELVRHYIPTPPVILEQETDAPYVSLSPNLISEEDLTPV
DEDSENPSLDVVTPTTQILLTTAPVGEELSDLGLPFTTLSGITGQPPTEPIANLKEDAEV
NALPDEEEVDLGVPGPYDPGEVLVKEAQDVSELETEVEILEPERELVVKPDEVLQPTPEQ
TEVSDPGEVSEPGKEIAEFSEPEEEVAEVSEPEEEVVEVSEPEEELVENQKEVVALKPEE
MEEKELDEVSEPVEVSEPEESEPETELDDSAVEIFKEGVEEGVEILQLEKEIIEVPREVK
EEPEQSIFEVSNSGPEPEKDEVSEQAPEAEEESELGGDVDEVTEQEEEMVESARSEETAP
EVSEETAPESPEETAPESPEETAPESPEETAHESPEETAPEVPEETAPEVPEETAPDVPE
ETAPDVPEETAPDVPEETAPDVPEETAPDVPEETAPDVPEETAPDVSELEAEIVEEEAEV
PEPEDEVVKSEEEVVEISEVEEVVETPAPGEGVVDVLEPASEPESGPEQEGHVTEVTETR
NEVVEAAESEEEPEKVSEPSEEGRGCKDSFRTRERIRRNTNVPQLEEDVVEDVKSKEEVV
AVPILKKEPVNISDPQLPPQGGKEEADVFEEKQEKVVENPEETSEPGEGTDHVIPPTKEL
PGVSKPESEEEVVVDVPEPNPEEEEGIFEILEPEPEDYVTEPPAESIKILRPLDGRGNLH
FGDEDSVQVVEDNKFLQPVRPDYHQPHEEDNLPIKPIDIQHSEEDVVEPDPEYPIIDDFY
IEEDVDSVDTQVESDTGAVTTTPTSKSDQTTSDIAEVTAPDKHDTSEGTEVTEDLPEETQ
ESDSSPERDISVTAAPVSDFFPTPPATSVDVSEVSSPSPTIDSGLFDVAEQSVISSAPES
SEDDSTEPEAESEQSEPAVVIIDEDLEEAVQKGGESQTSPPAAIEDAIDEVVKDLAVELD
QTDVATTEANELLDEGSGFLPVGEERTTVSVTAPPPVRYLTTPSMTKASQGRELVVFFSL
RVTNMDFSEDLFNKTSSEYRSLENTFLDVLLPFLQANLTGFKKLEILNFRKGSIVVNSKM
KFAKSVPYNITEAVHCVLEQFCSSASKNLHIHIDTHSLDVEPADQADACKFLACDEFSRC
VVNGRTKEAQCLCEPGFLSVDGLPCQSLCVLQPDYCQGGECHIVPGHGALCRYKDSYSLP
GLAS
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgggaatttggacttgttctcctgttcgttctcgctccacaagctgctggaatt
aaagagagcggcgtcaggctggactcgggagtgcaaacggaggcctccggccctgtacgt
ttggtggagctgctgaagatgtccacacaaactgcaggctcggggtttgaactggacaga
cgtcgatcaaagaggtctgtgtttttacactccggagtgagaatctgcccacaagagacc
atcaatgaagtgctcgccagccaccaggcatattaccagctcagagtttgtcaggaggct
gtgtgggaggcgttcaggatcttcttcgacaggatccccgggacggcggagtaccagaaa
tgggttcacacgtgtcaacacgagtcgctctgcatatctgacctcgccaaaaacttcagc
agctctgaggagcacatgagcatgattcacaggaggatgaaccggaggagagacgggagt
cctccatcacgagtggtgactcctgcaccgaaacagaagatccccgagatagcaggtgca
gaggctcagaccgtcgccccgtcggcggcctcaccgactgccaccaccagcaccaccatc
ctcctcagccctgtgagtgcctctccaacccccgccctcgatcagacccagccggccgag
gaggtcgaggagcagtggggagcagacctgaaggactcggagcttcctaatgtggtccct
gagaatccggtggagcagatcgtggagttcagtatcgacctggtggatccaggttacaga
gagctgctggatgatccagactcccctcagtacatcgacctggcccaacacctgcaggac
cagatgcagcatgtttttgacaaacttccaggatttaaaaccatccatgtgctgggaatc
agcgagacccaggacactgatgggcttggaggaatctcagtgcactactcacttgtcttt
gagattaattcacctaaaatcaactctgagaattcagagacagcgaccggcaccccggag
tcttcagccaactctggcctcagggaaatagtcgccaaggctttgcgtgaggaggcctcg
ctgccagttgatctggactcacttaacttcgaaccaggagcaatcctcctaccagcactg
acatcaacctcttcagtagaagtagtgaatgagtcaattgagcctgattcacacaacgag
tttgaagttttcactgatgagcctgaagttgataaacctcggctggtggttcccctcaca
cccatggagaaggaaaatgccctcgtgaccctgctagatcccacggctgtcccagatgac
gagacaacggcagtgactggtgggatggcagagagcagcgatcattccccggcctcagag
gatattactgatgagtcagaggcaatttttgtgagtgagcctgaaccatcaaatgaagaa
ggggaggaagaagaattgctgatcattacacatgagattgaaacaattcatcatgacgaa
accggtgaacttgtgagacactacatccccacccctcctgtgattctcgagcaggagaca
gatgcgccatatgtgagtctgtctcctaacctgatatcagaggaagacctgactcctgtt
gatgaggacagcgagaatcctagtttggatgttgttacccccaccacacagattttatta
actacagctcctgttggagaggagctgtctgatttggggctcccattcacaacgctttca
ggcatcacaggccaaccgcccactgagccaatagcgaaccttaaagaagatgcagaagtt
aatgctcttccagatgaggaagaggttgatttgggtgtccctggaccttatgaccctggt
gaggttttggtaaaagaagcccaagatgtttcagagttggaaactgaagttgaaatttta
gaaccagagcgagagttagtggtgaaacctgatgaagttttgcagccgacacctgaacaa
actgaagtttctgacccaggagaagtgtcagaacctgggaaagaaatagctgaattttca
gagccagaggaagaagtagctgaagtttcggagccagaggaagaagtagttgaagtttcg
gagccagaggaagagttggtagaaaatcaaaaagaggtggtagctttaaaaccagaagaa
atggaggagaaggagcttgatgaagtttcagaaccagttgaggtttcagagccagaagaa
tccgaaccagagacagaactagatgatagtgcagttgagatttttaaggaaggagtggaa
gagggagtggaaattttgcaactcgaaaaggaaatcattgaagttccaagagaggtaaaa
gaggaaccagaacaaagcatatttgaggtgtcaaattcaggtccagaaccggagaaagat
gaggtttcagaacaagctccagaagcagaggaagagtcagaactcggtggggatgtagat
gaggttactgaacaagaagaagagatggttgaatctgcaagatcagaagaaactgcacct
gaagtctcagaggaaacggcacctgaatcccccgaggaaacggcacctgaatcccccgag
gaaacggcacctgaatccccagaggaaacggcacatgaatccccagaggaaacggcacct
gaagtccccgaggaaacggcacctgaagtccccgaggaaacggcacctgacgtccccgag
gaaacggcacctgacgtccccgaggaaacggcacctgacgtccccgaggaaacggcacct
gacgtccccgaggaaacggcacctgacgtccccgaggaaacggcacctgacgtccccgag
gaaacggcacctgacgtttctgaactggaagcagagatagttgaggaggaagctgaggtt
ccagaaccagaggatgaggttgtaaaatcagaggaggaagtggtggagatttcggaagta
gaagaagttgtcgaaactccagcgccaggtgaaggtgtggttgacgtattggaaccagca
tctgaaccagaatcagggccagaacaggaagggcatgtaactgaagtgacagaaacacga
aatgaggtagttgaggctgcagaatcagaggaggagccagaaaaggtttcagaaccaagt
gaagaaggtagaggttgtaaagatagcttcagaaccagggaaagaatcagaagaaatacc
aatgtaccacaactagaggaggatgtagttgaggatgtaaaatcaaaggaagaagtggtt
gcggttccaatactgaagaaagagcccgtgaacatttcggacccgcaactgccaccacaa
ggtggaaaagaggaagctgatgtttttgaggaaaaacaagagaaggtagttgagaatcca
gaggaaacatcagaaccaggggaaggcacagatcatgttataccaccaacaaaagagtta
cctggggtttccaagccagaatcagaagaggaagtagtagttgatgtcccagaacctaat
ccagaggaggaggaggggatatttgagattttagagccagaacccgaggattatgttact
gagccgccagctgaatcaattaaaatccttcgccccttggacggcaggggaaatcttcac
tttggagatgaggattctgttcaggttgttgaagataacaagttccttcaaccagtcaga
ccggactatcaccagccacatgaggaagataacttacccatcaaaccaatagacatccaa
cattctgaagaagatgtagttgaacctgatcctgaatatcccattatcgatgacttttac
atcgaggaggatgttgatagtgtagacacacaagtggagagtgacactggtgccgtcaca
accacaccaacatcaaagagtgatcaaacaacctctgatattgcagaggtgacagctcca
gacaagcacgacacatcagagggcactgaagtcacagaggacttgccggaggagacacaa
gaaagtgattcatccccagaaagagacatcagtgtaacggcagcaccggtttcagacttc
ttccctacacctccagcaacttctgtcgatgtgtctgaagtgtcctcacccagcccaact
atagactctggactctttgacgtagcagagcaatctgtaatctcctctgctcctgagtct
tcagaggatgatagcacagagccagaggcagagtcggagcaaagtgagccagccgtcgtc
attatcgatgaagacttggaagaggcagtgcagaaaggaggtgaaagccaaaccagccct
ccagcagctatcgaagacgccattgacgaggttgtaaaggacctggcagtggagctggat
caaacggacgtagcaaccacggaggcaaatgagctgctggacgaggggagtggcttccta
cctgtgggtgaggaacgcaccactgtcagcgtcacagccccgcctccagtgagatacctg
accacaccctccatgaccaaagccagccagggcagggagctggtggtattcttcagcctg
cgcgtcaccaacatggacttctctgaggacctcttcaacaagacgtcttcagagtacaga
tccctggagaacaccttcttagacgtgctgctgccgttcctgcaggcgaacctgacgggc
ttcaagaaactggaaattcttaacttcaggaagggcagcatcgttgtcaacagcaagatg
aagtttgccaagtcggtgccgtacaacatcactgaggccgtccactgcgtcctggagcag
ttctgctcctccgcctccaagaacctgcacatccacatcgacacccactctctggatgtt
gaaccagctgatcaggccgacgcctgcaagttcctggcctgcgatgagttttcccgctgc
gtggtgaacggccggacgaaggaggctcagtgtctgtgtgagccgggcttcctgtcggtg
gacggcctgccctgtcagagtctgtgtgtcctccagccggactactgccaaggaggggag
tgtcacatagttcctggacacggagccctgtgcagatacaaagacagttattccctcccg
gggctggccagttaa
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