KEGG   Siniperca chuatsi (mandarin fish): 122863243
Entry
122863243         CDS       T08948                                 
Symbol
tbpl1
Name
(RefSeq) TATA box-binding protein-like 1
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
schu  Siniperca chuatsi (mandarin fish)
Pathway
schu03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:schu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    122863243 (tbpl1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:schu03000]
    122863243 (tbpl1)
   03021 Transcription machinery [BR:schu03021]
    122863243 (tbpl1)
Transcription factors [BR:schu03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    122863243 (tbpl1)
Transcription machinery [BR:schu03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     122863243 (tbpl1)
  RNA polymerase III system
    TFIIIB
     122863243 (tbpl1)
  RNA polymerase I system
    SL1/TIF-1B
     122863243 (tbpl1)
SSDB
Motif
Pfam: TBP P22_Gp10_C
Other DBs
NCBI-GeneID: 122863243
NCBI-ProteinID: XP_044025472
LinkDB
Position
LG16:complement(13704925..13710729)
AA seq 187 aa
MDSSNDEALDIIITNVVATFRTRCHLNLRTIALEGTNVIYKPEVGKVLMKLRKPKITASI
WSSGKIICTGATSEDDAKLGARRLARCLQKLGFKVRFSAFKVVNVLAVCSMPFAIHLIDF
TKNNRPIASYEPELHPAATYRIKNIKATIQVFSTGSITVTGPNVQNVATAVEQVYPLLFE
CRKPLCK
NT seq 564 nt   +upstreamnt  +downstreamnt
atggattccagcaatgacgaggcacttgatatcattatcaccaatgtggtggcaaccttc
aggaccaggtgccacctcaacctgcgcaccattgccttagagggaactaatgtcatctac
aagccggaagtagggaaagtcctaatgaagcttcgtaagcccaagataacagcctcaatc
tggtcctcagggaaaatcatctgcactggagcaacaagtgaggatgatgcaaagctgggt
gctcgcaggttagcacgctgtctgcagaaactgggcttcaaggtgaggttttcagccttc
aaagttgtgaatgtgctggcagtgtgctcaatgccgtttgcaatccatcttatagacttt
actaagaacaaccgacccattgccagttatgaaccagagctccatcctgctgccacgtac
aggatcaaaaatatcaaggctactatacaggtgttctctactggcagcatcacagttaca
ggaccaaatgtgcagaatgtggccacagctgttgagcaggtctacccactgctgttcgag
tgtcggaaacccctctgcaaatga

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