Siniperca chuatsi (mandarin fish): 122863278
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Entry
122863278 CDS
T08948
Symbol
casp8ap2
Name
(RefSeq) CASP8-associated protein 2
KO
K25593
CASP8-associated protein 2
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schu03019
]
122863278 (casp8ap2)
Messenger RNA biogenesis [BR:
schu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
122863278 (casp8ap2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding_7
INO80F
Motif
Other DBs
NCBI-GeneID:
122863278
NCBI-ProteinID:
XP_044025555
LinkDB
All DBs
Position
LG16:complement(4669703..4693128)
Genome browser
AA seq
1946 aa
AA seq
DB search
MEHWNIDTNDASGLLVPDVSEDSVDIYDGLDIGSNSNAEKSSPNASQLKESMDLYEEIVT
EEQQSRESTYSELKSRFQAAQNQIKELRRRLEQMEMQNTGLNTENYRLKKNISALLRTAR
QEVTRKDAEIQRLNQRSEKGRHHHHQSHINNLRDQNSSSRTATDSCKSRPPPPPPSSPPP
PHPPLPASPPREDHPPRDPPQPSRKESDSSTYQPSGSCIETRASKASSHSHLKSSSRGHC
DVPNKQTDHFVSKSSSSSSTRHIESDKHKSKHREEKCQSQKLSESTDRRHRIGSDPNKNC
YAPEKNRSHKADKEKEQRYGSRSCKSRNYLNVEGHHRAERAKSPPPEILHSVASSDDKKG
RSKERRRDKAKMSTSDSEHSAAHSSKEGYSRDHRKSKTGDGYIRSSDSKDRKKSSSNQHV
EHYSDSSKNREGDRLSKDYPRKEDRQREVEISRKHKRSILSETSREREKQRSKESDQGKA
DICSKERQEKTQETLKRSSEEPNITEKSFVEENSPNRKLCFMETLNLTLSPIKKPMLPID
ASQVGLTTVDKVVENEPDDENSQPNVEDMCVIDEVDSSELEAGLEDVAEQSPDISKTPRS
EKTQKRCDDAKDVQEKDKNRSETPAADKQLEDNSVQTTSAHSQPLDTAENQMTVHLTPKS
PESSSVKATEWDISKYHEDKTKLTSDSYVDECGPLEAADGEMSGSIYEEHTSNSSQKVNP
RNNTDQPVAVTEPIVHDSSVELTCRTPKTAVQKSLPVDSVEEGAAASPSRKNPVADQNNP
KSQQFFLPQDCQQRLCPPASSSIHDKDAFCMQDGPKDAEAVSSTISLESLPQEGLSLPEA
IYVLTQVNKDANDNSSIATEPSSSTGCVAVSKVSSTTEETTLPERYSDPTFTPSNSFSPG
KSHEGYVEPSSSVPLLHDEDSMMRTLSSLKRIPDAISPLRSPIRISKRSHLHVHGKPGHV
KSLQKDFSSTAVDANSEKLDVNKENKYPGSPANHDKQNLVDKVSDLPSRLSDNELEEGEI
LSESDEVAAGSPIPATKRAKFARPVRNKPSPKSVLKRTSEERCVASKETNETAGVSTRSP
KSRFKTVSPAETKASFSTIEKVMETFKLVRTEIRKKYMKLHKTFPKKSFYGVMENFQESF
LEFVDGAHFGQICAQEGELKSKLKKLIASVFCKVSNNGIVKRIFEQQAVDLKQKLWDFVD
VQVDYLFKDIYTTLKSLCNPERVQAEDKRPSVNENVSRQPPAKKSRCQQKEAQSAPTSLN
RITPSAVAPYKTGLGSRGKDIRITHVEKDRNVDPHPRNCPNTQTVVDFLLPKNIPSTPEK
NNISSLVVSQNASLLDKTDFELLTEQQASSLTFNLVRDSQMGEIFKCLLQGSDLLETSGI
TGDNTTWSLGTPRKDGERLLSITTPTKFDSPSKLLSQTKFDTPSKLIATWSSISPCKMSS
PRFKDQIPLNPALFDESCLLEVPSENRAMLQSSLASHRSYSILAEDLAVSLTIPSPLKSD
SHLSFLQPSSMHIMSTPDSVISAHISEDTLLDGEDATEQDIHLALDTDNSSCGSSSSVAS
EGLATPFVFKTDLPMQALVMEKSNDHFIVKIRQAATGADTTLTADDSLSQTLTEEDQQHK
EDDVQKGTPSNSVSSENNLSNLAESTGICQAAIGADIHLTQDESLTLTKDPSHKKDTPTQ
QNTSKVCFSENSQKPSESLKNLPKIAPSDNSLHNGVQSSDHFFGHISQATSREGITVTAD
ESASQTHHREEDMTTQQSLSKALLSDNSPHHPAESSETYQKSQVLASHVSDSERDEMEVS
EPERSLTVGEDISSTSEKDQTDCGKGRKRKKHQEKSKAKRSRKEEEESTEEMLSNCKSDN
SESKSSPASLSPNSLYARNVIRKKGEVVMSWTRDEDRAILIDLKTKGASRETFSALSEKL
NKPSGQIAHRFYQLMKLFKKQEKMDT
NT seq
5841 nt
NT seq
+upstream
nt +downstream
nt
atggagcattggaacattgacaccaatgatgcttctggtctcttggtacctgatgtcagt
gaagattctgtggatatctacgatggcctggatatcggttctaacagcaatgcagagaag
tcctctccaaatgcttcgcagctgaaagagtcgatggatctttatgaagaaattgtcaca
gaggaacagcagagtagagagtcaacatactctgagttgaagtccagattccaagcagcc
caaaaccaaattaaagagttgcgcaggagactggagcagatggagatgcagaatacaggg
ttgaatactgagaactaccgtctcaaaaagaacatctctgcacttttacgaacagctaga
caggaggtgacacgaaaagatgctgagattcagaggctgaaccaacggtcagagaaaggt
cgacatcatcatcatcaatctcatattaataatctgcgggatcaaaattcctccagtcgg
actgccacagatagctgcaagagtagaccacctcctccacctccctccagtcctcctccc
cctcatccacctctaccagcctcacctcccagggaggatcatcctccaagggatcctcct
caaccttccaggaaagaaagtgatagttctacctatcagcccagtggatcttgcattgag
acaagagcttcaaaagcatcatctcacagtcatttaaaaagttcctcaagaggacattgt
gatgtacctaacaaacagactgaccactttgtcagcaaatccagtagcagttcatcaacc
cgacatattgagtcagacaaacacaagtccaagcacagagaggaaaaatgtcaaagtcaa
aaactatctgaatcaacagacaggagacatagaattggttcagatcccaacaagaactgt
tatgcccctgagaaaaacaggtctcacaaggcagacaaagaaaaagaacaaagatatgga
tccaggtcatgtaaaagcaggaactatctaaatgttgaggggcaccacagagcagagagg
gctaaaagccctccaccagagattttacatagtgtagcttcctctgatgacaagaaaggg
agaagtaaagaacgaagacgagataaagccaaaatgtccacatcagactctgaacatagt
gcagctcacagctctaaagagggctacagccgagatcatagaaaaagtaagactggtgat
ggatatatcagaagttcagactcgaaggaccggaaaaagtcctcttcaaatcaacatgtt
gagcactacagtgattcctccaaaaacagagaaggagatagactttcaaaggattatcca
aggaaggaagatagacaacgtgaagttgaaatcagtagaaagcataaaaggagcattctg
tcagagacaagcagagaacgtgagaaacagagatcaaaagaatcagaccaaggtaaagcg
gatatctgtagtaaggaaagacaggaaaagacacaagagaccttaaaaagatcatccgaa
gaaccaaatatcactgagaaaagctttgtggaggaaaatagtccaaacaggaaactgtgt
ttcatggaaacattaaatctaaccctttcaccaattaagaagccaatgctgcccattgat
gccagccaggttggcctcacaacagtggacaaggtagttgaaaacgaaccagatgatgag
aattcacagcctaacgttgaagacatgtgtgttattgatgaagtagacagcagtgaatta
gaagcagggttggaagatgttgcagagcaatctccagatatctccaaaactccacgttct
gaaaagacacagaaaaggtgcgatgatgcaaaagatgtccaggaaaaggacaaaaaccgg
agtgaaactcctgcagctgacaagcaacttgaagacaattcagttcaaactacctcggct
catagccaacccctagatactgcagagaatcagatgactgtgcatctcacaccaaaatca
ccagagagtagttctgtaaaagcaacagaatgggacatttcaaaatatcatgaggataaa
accaagctgacctcagacagctatgtagatgaatgtggacctctggaggctgcagatggt
gagatgtctggaagcatttatgaagaacacacaagcaattcttcacaaaaagtaaaccct
agaaataatactgatcaacctgttgctgttaccgaacccattgtgcatgattcaagtgta
gaactgacatgtagaactcctaaaactgcagtacagaaaagcctccctgtggattcagtt
gaagaaggtgcagctgcttcaccctcaaggaaaaatcctgtagctgaccagaacaatccc
aaaagtcagcaattttttctacctcaggactgtcagcaaagactgtgtcctcctgcttcc
agttccattcacgacaaagatgctttttgtatgcaagatggtcctaaagatgcagaagct
gtatccagtacaataagcctggaatcacttccacaagaagggctgagtcttcctgaggct
atttatgttttaacacaggtaaataaagacgccaatgacaacagtagcatcgcaactgag
ccaagttcttccactggctgtgtcgcagtgtccaaagtcagcagtacaacagaagagacg
acgctgccagaaaggtacagtgaccccactttcacaccaagtaatagcttcagtcctgga
aagagtcatgagggttatgttgagccttccagttctgtgccattactccatgatgaggac
tccatgatgcgcacattgagcagtctgaagagaatccctgatgccataagccctctgagg
agcccaatacgaatatccaagagaagtcatctccatgttcatggcaagccaggtcatgtc
aagagccttcaaaaagatttctccagcacagctgttgatgccaactcagagaagttggac
gtaaacaaagaaaacaaatatccgggttctcctgcaaaccatgacaagcaaaacttggtg
gacaaggtatccgacctgccttcaaggctctctgacaatgaactggaggaaggggaaatt
ttaagcgaaagtgatgaggtggctgcaggttctcctattcctgcaaccaagagggcgaag
tttgcacgaccagtcagaaataaaccaagtcctaagtctgtgttaaagaggacatctgaa
gaaaggtgtgttgcatcaaaagaaactaatgaaacagcaggtgtatcgacacgaagtcca
aagagtcgttttaaaacagtttctcctgcagaaactaaagcttctttttccaccatagag
aaagtaatggagacattcaagttggttcgtactgagatcagaaaaaagtacatgaagctt
cataaaacctttcccaagaagagcttttatggtgtgatggaaaatttccaggagtctttt
ttagaatttgtggatggtgctcattttggtcaaatatgcgctcaggaaggggagctgaaa
tccaagctaaagaaattgattgcatctgtgttttgcaaagtatcaaataatggtattgtg
aaacgcatctttgaacagcaagcagtcgatctaaagcaaaagttgtgggactttgtagat
gtccaagttgactacttgttcaaggatatttacacaacactgaagagcctttgcaaccca
gaaagagttcaggctgaggacaagaggcccagtgtaaatgagaatgtatctagacagcct
cctgcaaagaagtcacggtgtcaacaaaaggaagcacaatctgctccaaccagcctgaat
cgaatcacgcctagtgctgtggcaccttacaaaacaggccttggaagcagaggcaaagat
atcagaatcacacatgtggaaaaagacaggaatgttgatccgcatccaagaaattgccca
aatacacaaactgtggtagatttccttcttcctaaaaatattccttcaactccagagaaa
aataacatatcttctttggttgtctctcaaaatgcctctttgcttgacaaaactgacttt
gagcttctcacagaacaacaagcctccagtttaactttcaacctggtgagagactctcaa
atgggagaaatcttcaagtgtctcctgcaaggatccgacttactagaaaccagtggcatc
actggagacaacaccacctggtcccttggtacaccaaggaaggatggagagagactcctc
agcatcaccacaccgactaaatttgactctccgtctaaactgctttcccagacgaaattt
gatactccctccaaacttatcgcaacatggtctagcatttcaccttgcaagatgtcgtct
ccacgattcaaagatcagatcccactgaatcctgctttatttgatgaaagttgcttgtta
gaagtgccatcagagaatagagcaatgttacagtccagcttggcttcacataggtcatat
tccattctagctgaagatctggcagtctccctcaccattccatcacctctcaagtccgac
agccatctcagcttcctacagccatcaagcatgcacatcatgtccactccagacagtgtc
atcagcgctcacataagtgaggacactctgttggatggggaagacgctacagaacaggac
attcacctggccctcgacacagacaactccagctgtggctccagcagcagcgtggcctcg
gaaggactcgccacacctttcgtgttcaagactgacctgcccatgcaggcgctagtgatg
gagaagtcaaacgatcatttcatcgtgaagattcgtcaggcagccactggcgcagatacc
acgctcactgctgatgacagcttaagtcaaacactaacagaagaagatcagcaacataaa
gaagacgatgtgcagaagggtactccttcaaattctgtatcatcagagaacaacctgtct
aaccttgctgaaagcactgggatctgtcaggctgccatcggtgcagatatccatctcact
caagatgagagcttaacactaacaaaagatccatcccacaaaaaagatacgccaactcaa
caaaatacctcaaaggtttgtttttctgagaattcacagaaaccttcggagtctctgaaa
aatctgcctaaaattgctccttcagataacagtttgcacaatggtgttcaaagctccgat
catttctttgggcatatcagccaggcaaccagcagagaaggtatcacagtcactgctgat
gagagcgcaagtcaaacacaccacagagaagaagacatgacaacacaacaaagtctctca
aaagctcttttgtcagataacagtccacatcaccctgctgaaagctctgaaacatatcaa
aagagccaagtgttggcgtcacatgtttcagactcagagagagatgaaatggaggtgtca
gagccagagagaagtctcacagttggagaggacataagcagcacatcagagaaagaccaa
acggattgtggcaaaggtagaaaacggaagaagcaccaggagaaatcaaaagctaagcgg
tccagaaaggaggaagaggagagcacagaagagatgttgtccaactgcaagagtgataat
agtgaatccaaatcctccccagcatcgctgtcccccaacagtctctatgccaggaatgtc
atcaggaagaagggtgaggtggtgatgtcatggaccagagatgaagatcgagctattcta
attgaccttaagacaaaaggggcttcacgtgagactttttctgccttgtcagagaagctt
aataagccatcagggcagattgctcacagattttaccagctcatgaagctttttaagaag
caggagaagatggacacttga
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