Siniperca chuatsi (mandarin fish): 122863293
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Entry
122863293 CDS
T08948
Symbol
rad51
Name
(RefSeq) DNA repair protein RAD51 homolog 1 isoform X1
KO
K04482
DNA repair protein RAD51
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03440
Homologous recombination
schu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122863293 (rad51)
03460 Fanconi anemia pathway
122863293 (rad51)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122863293 (rad51)
04121 Ubiquitin system [BR:
schu04121
]
122863293 (rad51)
03400 DNA repair and recombination proteins [BR:
schu03400
]
122863293 (rad51)
Membrane trafficking [BR:
schu04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
122863293 (rad51)
Ubiquitin system [BR:
schu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
122863293 (rad51)
DNA repair and recombination proteins [BR:
schu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
122863293 (rad51)
RecA family proteins
122863293 (rad51)
FA (Fanconi anemia) pathway
Other FA pathway factors
122863293 (rad51)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
AAA_25
RecA
HHH_5
ATPase
AAA_22
HHH
AF1548-like_C
PAXNEB
Motif
Other DBs
NCBI-GeneID:
122863293
NCBI-ProteinID:
XP_044025595
LinkDB
All DBs
Position
LG16:complement(1083252..1088619)
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AA seq
340 aa
AA seq
DB search
MAMRSEARAEAEVEAEEEDAYGPQPLCRLEQCGISASDIKKLEDAGFHTIEAVAYAPKKE
LLNIKGISEAKADKVLAEAAKLVPMGFTTATEFHQRRAEIIQISTGSKELDKLLQGGIET
GSITEMFGEFRTGKTQLCHTLAVTCQLPIDQGGGEGKAMYIDTEGTFRPERLLAVAERYG
LVGSDVLDNVAYARAFNTDHQTQLLYQASAMMAESRYALLIVDSATALYRTDYSGRGELA
ARQGHLGRFLRMLLRLADEFGVAVVITNQVVAQVDGAAMFSADPKKPIGGNILAHASTTR
LYLRKGRGETRICKIYDSPCLPEAEAMFAINADGVGDAKD
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggctatgaggagcgaggccagggcggaggcggaggtggaggcggaggaggaagacgcc
tacgggccgcagcctctgtgcagactggagcaatgtggaatcagtgccagtgacatcaag
aagctggaggacgcgggtttccacaccatcgaggcagtggcctacgcacccaagaaggag
ctgctcaacatcaagggcatcagtgaggccaaagctgacaaagttctagctgaagctgcc
aaacttgtgccgatgggtttcaccacagctactgagttccaccagaggagagcagagatc
atccagatctctacaggctccaaggagctcgacaaactcctgcagggagggattgagacg
ggctccatcacagagatgtttggagagtttcggacagggaagacccagctgtgccacaca
ctcgctgtcacctgtcagctgcccattgatcaggggggtggagaaggtaaagccatgtac
atcgacacagagggaaccttcagaccagagagactcctcgctgtagctgagaggtatggg
ctggtaggcagtgatgttctggacaacgtggcctacgcccgagccttcaacacagaccat
cagacccagctgctataccaagcctccgccatgatggctgagtccaggtatgctctgctg
atagtggacagcgccacagctctgtacagaacagactactccggcagaggtgagctggcg
gccagacagggccacctgggacgcttcctccgcatgctgctgaggctggcagacgagttt
ggtgttgccgtggtgataaccaaccaggtggtagcacaggtggatggggcagccatgttt
tctgcagatcccaagaaacccattggaggcaacattctggctcacgcctccaccacacga
ctgtacctgaggaaaggcaggggagagaccaggatctgtaaaatctacgactcgccctgc
ctgccagaggccgaagccatgtttgccattaacgccgatggagtgggtgacgccaaggac
tga
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