Siniperca chuatsi (mandarin fish): 122863302
Help
Entry
122863302 CDS
T08948
Symbol
pals1b
Name
(RefSeq) MAGUK p55 subfamily member 5b isoform X1
KO
K06091
MAGUK p55 subfamily member 5
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04519
Cadherin signaling
schu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
122863302 (pals1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
122863302 (pals1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
schu04990
]
122863302 (pals1b)
Domain-containing proteins not elsewhere classified [BR:
schu04990
]
PDZ domain-containing proteins
MAGUK family proteins
122863302 (pals1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Guanylate_kin
L27_N
PDZ
SH3_2
PDZ_6
L27
SH3_1
PDZ_2
SH3_9
A-sol_ELP1
ZNHIT3_C
Motif
Other DBs
NCBI-GeneID:
122863302
NCBI-ProteinID:
XP_044025613
LinkDB
All DBs
Position
LG16:complement(19342326..19361397)
Genome browser
AA seq
650 aa
AA seq
DB search
MITSHMNGYVQEASGQLKSHRERAVDCPGEESSLVKSPHCSAHMERIQHYQEELRKRREE
DSRGKHDIDPNASLRLKKLSQNPKVGIDNPTFEGKEKATKDTCSQDPVAELEEVLQALKY
VQHCLTDAQSQQDVELIMQLLAEEDFRNAYTIYSAISQQKSRVSPTSPLTAQAEDLCQEV
QKILQSSQQKEGLELKALLTNPHLQALMQVHDSVAVHEMAEENETQYIGETVKLVRLEKA
RDTPLGATVRNDMDSVVVSRVVKGGMAESSGLLSEGDEILEINGISIRGKHVNEVHDLLQ
QMQGTLTFLLIPSSQIKPAPHRQTVMHVRAYFDYDPSDDPFVPCRELGLSFQKGDILHVI
SQDDPNWWQAYRDGDEDNQPLAGLIPGKSFQQQRETLKKTITDKSREHQGKLWCAKKSKK
QRKKSTPNLTKNIDYDDILTYEEMSLYHQPANRKRPIALIGPTNSGHDELRRRLLSIEPE
RFAVAVPHTTRNPRIHERNGCEYHFVSRPAFETDLAAGKFIESGEYEKNLYGTSTDSIRH
VINSGRICLLCLHTRSLQILRSSNLKPYVIFIAPPAQERLRTLLATEGKTPKPEELKEVI
EKAREMEHNFGHFFDATIVNMDPDQAFHELRRLIDKLDTEPQWVPTSWLC
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgatcacgtcccatatgaacggttatgtgcaagaggcctctggtcagctcaagagccac
agggagagggcagtggactgtccaggggaggaaagtagccttgtcaaatctccacactgc
agtgcccacatggagaggatccagcactaccaagaggagctgaggaagaggagagaggag
gacagcagggggaagcatgacatcgaccccaacgcttcactgaggctcaagaagctgtca
cagaaccccaaagtgggcattgacaatcccaccttcgaggggaaggaaaaggccaccaaa
gacacatgctcccaggatcctgtagccgaactggaggaggtactgcaggctctgaagtat
gtgcagcactgcctgactgatgcacagagccagcaggatgtggagctgataatgcagctc
cttgcagaggaggacttcaggaatgcctacaccatctacagtgctatatcacagcagaag
agcagagtcagtcccacctcacccctcacagcacaagcagaggatctctgccaggaggta
cagaagattctccagtccagccaacagaaggagggtttggagcttaaggctctgctcacc
aatcctcatctccaggcactgatgcaggtccatgacagtgtggcagtgcatgaaatggca
gaggaaaatgagacccaatacattggagagacagttaaactggtgcgcctggagaaagcc
cgcgacactccactgggtgcgacagtacgtaatgacatggacagtgtggtggtgagtcgt
gtggtgaaaggcggcatggcagagagtagcggccttctcagtgagggagatgagatcctg
gagatcaacggcatttctattcgtgggaaacacgtcaatgaagtccacgacttactgcaa
caaatgcagggcactctgaccttccttctcatcccgagctctcagattaaacctgccccg
cacagacagactgtgatgcatgtacgagcttactttgactacgacccctctgatgacccc
ttcgtgccatgtcgcgagctgggcctgtccttccagaagggagacatcctccatgtcatc
agccaggatgaccccaactggtggcaggcctacagggacggagatgaggacaaccagccc
ctggctggactcattccagggaaaagcttccagcaacagagagagaccttgaagaaaact
ataacagacaagagtcgagagcaccaagggaagctttggtgtgcgaagaaaagcaagaaa
cagaggaagaagagcacacctaacttgaccaaaaatattgactacgatgacatcctgacc
tatgaggagatgtcgctttatcaccagcctgccaatcgtaaacgccccatcgctctgatc
ggtcccacaaacagcggtcacgatgagctgcgtcggcgacttctgtccattgaaccagaa
agatttgctgttgctgttccgcacacaaccagaaacccaaggatacatgagcggaatggg
tgcgagtaccattttgtgagtcggcctgcctttgaaaccgacttagcggcagggaagttc
attgagtctggggaatatgagaagaacttgtacggcaccagcaccgactcaattcgacac
gtcatcaactctggacgcatctgtttgctctgcctccacaccaggtcactgcagatattg
aggtcctccaacctcaagccctatgtcatcttcatcgctcctcctgctcaggaacgacta
cgcaccctgctggccacagaggggaaaacaccaaagcctgaagagctaaaggaggtcatt
gaaaaggcccgcgagatggagcacaatttcggccacttctttgatgcaaccattgtgaac
atggatccagaccaggcttttcacgagctgcgcaggctgatagacaagctggacactgag
ccacagtgggtgcccacctcctggctgtgctag
DBGET
integrated database retrieval system
