Siniperca chuatsi (mandarin fish): 122863309
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Entry
122863309 CDS
T08948
Symbol
parp1
Name
(RefSeq) poly [ADP-ribose] polymerase 1 isoform X1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03410
Base excision repair
schu04210
Apoptosis
schu04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122863309 (parp1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
122863309 (parp1)
04217 Necroptosis
122863309 (parp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
schu03032
]
122863309 (parp1)
03036 Chromosome and associated proteins [BR:
schu03036
]
122863309 (parp1)
03400 DNA repair and recombination proteins [BR:
schu03400
]
122863309 (parp1)
Enzymes [BR:
schu01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
122863309 (parp1)
DNA replication proteins [BR:
schu03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
122863309 (parp1)
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
122863309 (parp1)
DNA repair and recombination proteins [BR:
schu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
122863309 (parp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
YkuI_C
Motif
Other DBs
NCBI-GeneID:
122863309
NCBI-ProteinID:
XP_044025621
LinkDB
All DBs
Position
LG16:15481218..15494425
Genome browser
AA seq
1014 aa
AA seq
DB search
MADSQEDKLYRAEYAKSGRASCKKCKENIAKDSLRMAIMVQSPMFDGKVPHWHHFSCFWQ
RAAAQSTADIAGYSDLRWEDQEKVKKAIESGGAAGGKGDQKSGAKGEKTLNDFAVEYAKS
NRSTCKGCEQKIEKDQIRVSKKTVDPEKPQLGLIDRWYHTACFVSRREELAFKSEYSAAQ
LKGFNALRAEDKDELNKRLPAVKTEGKRKADEVDGVSKKQKKEEEDEKKKLEEQLKNQSQ
LIWGIKDKLKKFCSTNDMKELLIANGQEVPSGESNVVDCLADGMAFGALEACKACKGQLV
FKGDAYYCTGDISAWTKCVFKTATPIRKDWVIPKEFHEVPFLKKFKFKRQDRVYPKEAPN
QTLTAAKAEPLASASSASTKLLPEGAPADKPLTGIKLLAVGKLTKNKDDLKAAVEELGGK
ITSTANKASVCLSTKKEVEKMSKKMEEVREAGVRVVSEGFLTDIKSSGKALQELVSLHAI
SPWGAEVKVEAQAPSVASKSGALATKSTGRVKEEEGGSKTKKMKLTVKGGAAVDPDSGLE
NSAHVLEQKGKMYSATLGLVDIVRGTNSYYKLQLLEDDVQKRYWVFRSWGRVGTTIGGNK
LDKFHDKNSALDNFLGVYKEKTGNDWGSSNFTKYPNKFYPLEIDYGQDEEAVKRLTATAG
TKSKLAKPVQELIKTIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYALLTEVQQAV
SDCLPESQVLDLSNRFYTLIPHDFGMKKPPLLNNLDYIQTKVQMLDNLLDIEVAYSLLRG
GAQDNERDPIDINYEKLKTKIEVVDKTTDEAEIIIQYVKNTHAATHNTYTLEVQEIFKIV
REGERQRYRPFEELHNRQLLWHGSRTTNYAGILSQGLRIAPPEAPVTGYMFGKGVYFADM
VSKSANYCHTSQSDPVGLLLLAEVALGNMHELKKASHITKLPKGKHSVKGLGRTAPDPSA
ATTLDGVQVPLGKGTHTNIDDTSLLYNEYIVYDVAQINMKYLLKIKFNYQTSLW
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atggcagactctcaggaggacaagctttatagagcggaatatgccaaaagcggccgtgcg
tcgtgtaagaaatgcaaggaaaacatagctaaagactcgctgaggatggccatcatggtg
cagtcacctatgtttgatgggaaggtcccccactggcaccacttctcctgcttctggcag
cgagcagcagctcagtccactgctgatatcgctgggtattccgacctccgctgggaggac
caggagaaggtcaaaaaggccattgaaagtggtggagcagcaggaggaaaaggggaccag
aagagtggagctaaaggagagaagacgctgaatgactttgcggttgaatatgccaagtca
aaccgcagcacatgcaaaggctgtgagcagaaaatagaaaaggatcagatccgtgtatcc
aagaaaactgtggacccagagaagccccagctgggtctgatcgaccgctggtaccacaca
gcgtgtttcgtgagccgtagggaggaactggccttcaagtctgaatacagcgccgcccag
ctgaagggtttcaacgcactacgggcagaagacaaggacgaacttaataagaggctccct
gcagtcaaaactgaaggaaagcgtaaagctgatgaggtggatggagtatcaaagaaacag
aagaaggaggaagaggatgagaagaagaagctggaggagcagttgaagaaccagagtcag
ctgatttggggaatcaaggacaagctgaagaagttttgctcaaccaatgatatgaaagag
ctgctgattgcaaatggccaggaggttccctcaggagaatcaaatgtggtggactgcctg
gccgacggcatggcttttggtgctcttgaggcctgtaaagcgtgcaagggccagctggtg
ttcaagggtgatgcttattactgtacgggggacatctcagcctggacaaagtgtgtgttc
aaaactgcaacaccaatacgcaaagactgggtcatccccaaggaattccatgaagttccc
ttcctgaaaaaattcaagttcaagcgacaggacagggtttacccgaaggaggctcccaac
caaacccttactgcagccaaagcagaacccttggctagtgcatccagtgcctcaactaag
ctactgccagagggagcacctgcagacaaacctcttactggcataaaactgttggctgtg
ggcaagctgaccaagaacaaggatgatctaaaggctgctgtagaggagctgggcggaaag
attaccagcacagccaataaggcctctgtctgcctcagcaccaagaaggaggtggagaag
atgagtaagaaaatggaggaagtgagggaggctggtgtgcgtgtggtctccgagggtttc
ctcacagatatcaagtcgtcgggtaaagccctccaggaactggtctccctgcacgctatc
tcgccctggggtgcagaggtcaaagtcgaggctcaagctccatctgtggcctccaagtct
ggagcgctggctaccaagagcaccggcagggtgaaggaggaggaaggtggtagcaaaacc
aaaaagatgaaactcacagtcaaaggaggagctgctgtggatccagattcaggtctggag
aacagcgctcatgtcctggagcagaaggggaagatgtacagtgctacgctaggtcttgtg
gacattgtcagaggaactaactcctactataaactgcagctgctggaggatgatgtccag
aagcggtactgggtgttcaggtcatggggcagagtgggtaccaccatcggaggcaacaag
ctggacaagtttcatgacaagaactctgccctggacaacttcctgggtgtctacaaagag
aagacaggcaacgactggggttcctccaacttcaccaaatatcccaataagttctatccc
ctggagattgactatggacaggatgaggaagcagtgaagaggctgacagccaccgccggc
accaagtctaagctggccaaacccgtccaggagctgatcaagacgatctttgatgtagag
agcatgaagaaggccatggtggagtttgagattgaccttcagaagatgcccctcggaaag
ctgagtaagaggcagattcagagtgcctacgctctcctcactgaagtacagcaggctgtg
tcagattgtctgcctgagtcccaggtactggatctctccaatcgcttctacaccctgata
cctcatgactttggtatgaagaaacctccactgctcaacaacctggactacattcaaact
aaagttcagatgctggacaacctgttggatattgaagtggcatacagcctgcttagagga
ggggcccaggacaatgagagggatcccatcgacatcaactatgagaaactcaaaaccaag
attgaggttgttgacaagactacagatgaggctgagatcattatacaatatgttaagaac
acccacgctgctacacacaacacttacaccctggaagtgcaagaaatcttcaaaattgtt
cgagagggagagcgccaacggtaccgtccctttgaggagctacacaatcgccagctgctg
tggcacggttctcgcaccaccaactacgctggtatcttgtctcagggtcttcgcattgcc
cctccagaggccccagtgactggttacatgttcggcaaaggtgtgtactttgccgacatg
gtgtccaagagtgcaaactactgtcacacctcccagtcagaccctgtaggcctcctcctg
ctggctgaggttgccctcggcaacatgcatgaattgaagaaggcctcccacattacaaaa
ttacccaagggcaaacacagtgttaagggtttgggtagaactgctcctgatccaagtgct
gctaccactttagatggggtgcaagtgcctctggggaaaggaactcacactaacattgat
gacacaagtctactgtacaacgagtacattgtgtatgatgtagcgcagataaacatgaag
tatctcctgaagatcaagtttaactaccagacatccctgtggtga
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