Siniperca chuatsi (mandarin fish): 122863406
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Entry
122863406 CDS
T08948
Symbol
gli1
Name
(RefSeq) zinc finger protein GLI1
KO
K16797
zinc finger protein GLI1
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
122863406 (gli1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122863406 (gli1)
Transcription factors [BR:
schu03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
122863406 (gli1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
122863406
NCBI-ProteinID:
XP_044025828
LinkDB
All DBs
Position
LG2:12678004..12732904
Genome browser
AA seq
1484 aa
AA seq
DB search
MPVDMQPHQGLYHYETSPSQPSRGLVPSDQSPYSDVSSLRGPLLNGPPQDCRAMYNPMTP
SMTHGSGPGQGIAHCMDQYMRPPQAPPPHSMMGHRGMPPTEGGNSTPYCNQNNMMSSHHN
FCQIQPGSDQICSGDGSRFSTPRSMLKLSKKRALSISPLSDASVDLQTVIRTSPNSLVAF
VNSRCNPNGASSYGHLSVSAMSPSLGYSSNINCQSRQQGSMYGGGGGTPLGGHAPGPCQA
SRLPPHNPRLHAPPKHGHLKTEPGLGGVMDGMNVKSLEERSEGDVASPSSTGTQDPLLGL
LDGRDDLDKEDGKPEQEAIYETNCHWESCNKEFDTQDQLVHHINNEHIHGEKKEFVCHWQ
ECSREQRPFKAQYMLVVHMRRHTGEKPHKCTFEGCNKAYSRLENLKTHLRSHTGEKPYVC
EHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHI
TKKHRGDTGPRPPGSAMTPGGQSSELLLEKEETRREDCKLLAPETALKSQPSPGGQSSCS
SERSPLGSANNNDSGVEMNLNAAGSLEDLTALEDGVAGGGGGGEPGSVGGTMGMSAQALK
RLENLKIDKLKQIRRPTPPARCANNKLPALPGPGENMGMCGPSPLLSNRRVMELSNHELG
GGTSIGCSSNDRRGSGTSSLSSAYTVSRRSSMVSPYLSSRRSSEVSQMGGTGGGGCHLLG
PEQSGGDPLSPETNRRGAPCPGGGGLPGLPNLTPAQQYSLKAKYAAATGGPPPTPLPNME
QTGPPGRRGGVLSEYQGQPLPPFLQQGGPRRHSANTEYGTGVIYPHQAPGNNSRRASDPV
RSVADPQAHPKRFNSLNNVAMMGRRNALQHRGSDTSLARHMYSPRPPSITENVMMEAMGM
EPHLAPVDARDRSMMLPPGERSFMGYQQHHQTLGGVRGGVPLSNQLSPSHDSLSCPDQAY
MQAHYQNQGREVTSRAGGNPIGQARPSHSEGMSNTLLQQAEYSMSTCQLSPSGPHYPSIG
QGGDAGGPWSDTHSHALQNQRGMQYSDPSLQPQQTQAHFSNQTGLYNNPDGTQKLIIKPE
QQFHPGMGSGDACQSAKLQQQRMLLQQTQGYPQQTGQVMMRNSNNPSCDFQGPNQNSFPS
GGGLSLGCAGTVLSDGQRSETPMMQVKEMMVRNYVQSQQALMWEQQQEQQQQQQQSGIKP
PPLSDNMDMSAQTAMMQHSPQHQNQNLYSSQPYPSYPNQNLVMSPPAHSQGPSAVTPKDQ
QLTGLQGSCYGQEIVVPRPPQGRKPLSRQNSLSQVGGGYLGSPPHLSPVHSTSSPRRAVR
LPPVQHPQHPQSEMFSPSNNNMYYSGQINMDMEKHMDPQTGPCLNQQHSMGSNLDPTGGT
KSAPMAPYPESGPISNALENLDLDNARIDFTSIIDDAESSSFSPVNNPLQGQPGSSSQAS
SRLTTPQTSVSLAAGPGLSNMAVGDMTSMLTSLAGENKYLNTLS
NT seq
4455 nt
NT seq
+upstream
nt +downstream
nt
atgccagtggacatgcagccacaccaggggctgtatcactatgagacctcacccagccag
ccctccagaggcctagtcccatcagaccagtctccatacagtgatgtgtcctcgctgcgt
ggcccgctcctcaacggccctccccaggactgccgcgctatgtataatcccatgactccc
agtatgactcatggatcaggaccaggacaggggattgcccactgcatggatcaatatatg
aggccccctcaggccccaccgccacacagtatgatgggccacaggggcatgccgcccaca
gagggtggtaatagcaccccctactgtaaccagaacaacatgatgtcctctcatcacaac
ttctgccagattcagcctggctctgatcagatttgctcaggcgatggctcgaggttctcc
acacctcgttccatgctgaagctgagtaaaaaaagagctttgtccatctctcctttgtct
gatgccagtgtagacctgcagactgtgatccggacatcacccaactccctggtggccttt
gttaactctcgctgcaaccccaacggggccagttcttatggccatctctctgtgagcgcc
atgagcccatccctcggctattccagcaatataaactgccaatccaggcaacaaggttcc
atgtatggaggaggcggggggacacctcttggtggacacgcaccaggtccctgccaagct
tcccgcttacctccccacaatcctcggctccacgctccgcccaagcatggtcatctgaag
acagagccagggctgggaggtgtgatggatggcatgaatgtgaagagcctggaggagagg
tcagagggagatgtggccagtccttcttccactggtactcaggaccctctcctgggtctc
ctggatggcagagatgacttggacaaggaggacgggaagcctgaacaagaggccatctat
gaaaccaactgccactgggagagctgcaacaaggaatttgacacacaagaccagctggtt
catcacatcaacaatgagcacatccatggcgaaaagaaagagtttgtgtgtcactggcag
gagtgctctcgggaacagaggcctttcaaagcccaatacatgctggtggttcatatgcgc
aggcacacaggagagaagccacacaaatgcactttcgaaggctgtaataaggcctactct
cgcctggagaatttgaagacccacctgcgctctcacactggagagaaaccatatgtgtgt
gaacatgaaggctgcaacaaggccttctccaatgcttcagaccgggccaagcaccagaac
cgaactcactccaatgagaaaccttatgtatgtaagatccccggctgcactaagcgatac
acagatccaagctctttgcgtaaacatgtgaagacggtgcacggccctgaagcccacatc
accaagaagcatcgtggagacacaggacctcgaccccctggttcagctatgacccctgga
ggtcagagttctgaactgctgctagagaaagaggagacacgcagggaggactgcaaactt
ttggctcctgagactgctctgaaatcccagccaagccctgggggtcaatcatcctgcagt
agtgaacgctctccactggggagcgccaacaacaatgacagtggggtggagatgaacctg
aatgcagcaggcagtctggaggatctcacggcactggaggatggagttgcaggtggagga
ggaggaggggagccaggaagtgtaggaggaacaatgggaatgtcagcacaggctttgaag
aggctggagaacctaaagattgacaagctgaagcaaatccgcaggccaacccctcctgcc
cgctgtgctaataacaagctacctgctcttcctggtccaggggagaatatgggaatgtgt
ggaccttctccactgctctcaaatcgacgcgttatggagctgtccaatcacgagttagga
ggtggcacatcgattggctgctcttctaatgacaggagaggaagcggcaccagcagtcta
agctccgcttatactgtcagccgtcggtcctccatggtgtctccttacctgtctagccgg
cgctccagtgaggtctcacaaatgggaggaacaggagggggagggtgtcacctccttggc
ccagagcagagcgggggagaccccctctctcctgagaccaatcgcagaggagctccgtgt
cctggaggaggaggattgccaggtcttcctaatttaacacccgcccagcaatacagccta
aaggccaaatatgctgcagcaactggtggaccgccacctacccctttacccaatatggag
cagacaggtccgccaggcagaagaggaggtgttttgagtgagtaccaggggcagcctctg
cctcctttccttcaacaaggtggtccacgtaggcacagtgccaacacagagtatggcact
ggtgttatctaccctcaccaggctccaggtaacaacagcaggcgagcaagtgacccggtt
cgatcagtagcagatccacaagctcatcccaagcgcttcaatagccttaataatgtagcc
atgatgggccgaaggaatgcgctgcaacaccgtggctctgacaccagtcttgcccgccac
atgtactcccctcggccacctagcattacagagaatgtaatgatggaggctatgggtatg
gagccccaccttgcccctgttgatgccagggatcgttccatgatgttgcctcctggagag
agaagcttcatgggataccagcaacaccatcaaactcttggaggagtcagaggtggagtt
cctctttcaaaccaactgtccccaagccatgactctctgagctgcccagaccaggcttac
atgcaggcacactaccagaaccagggaagggaggtcacttccagggctggtggaaatcca
ataggccaagcaaggcctagtcactcagagggcatgtctaatacacttctccaacaggcc
gagtatagtatgagcacctgccagctcagtccctcaggcccccattaccctagcataggc
cagggcggtgatgctggaggcccttggagtgatacccacagccatgctcttcagaaccag
cgaggaatgcagtattcagatcctagcctgcagcctcaacagacacaggcccatttcagc
aatcaaacaggcctctacaacaatcctgatggaacccaaaaactcatcatcaagcctgag
cagcagttccaccctgggatgggaagtggagatgcctgtcaaagtgctaagctccaacag
cagcggatgctcctccagcagactcagggttacccacaacagacaggccaggtcatgatg
aggaactctaacaatcccagctgtgactttcaagggccgaaccagaactccttccccagt
ggcgggggcttgagcttgggctgtgctggcactgtgctttcagatgggcagaggtcagaa
acccccatgatgcaggtgaaggagatgatggtgaggaactatgtacagtcccagcaagca
ctcatgtgggagcagcaacaagaacagcaacaacagcagcagcagagtggaataaaacct
cctcctctatcggataatatggatatgagtgcccagacagcaatgatgcagcatagtcca
cagcaccaaaaccagaatctttactccagccagccctatccgtcctaccccaaccagaac
ctggtcatgagccctccggcccacagccaagggcccagcgctgtgacacctaaagaccag
cagctgactggtctccaaggctcatgttatggccaggagattgtggtccctaggcctcct
cagggacggaaacctctcagccgccagaacagcctgtcacaggtaggaggaggctacctg
ggcagcccaccccacctaagccctgtccactccacttccagccctaggcgagcggtccga
cttcctccagttcagcatccacagcacccacaaagtgaaatgttctctccttccaataac
aacatgtactactcgggtcagataaacatggatatggaaaaacacatggacccccagact
ggaccttgtctcaaccagcagcacagtatggggtccaacctggacccaacgggtggcaca
aagtctgcccccatggctccctatcctgaatctggccccatctccaatgccttagaaaac
ctggacctggacaatgctcgcatagacttcacctctatcattgatgatgctgagtcttcc
tcgttcagcccagtcaacaatccccttcagggtcagccagggtcttcctcccaggcctca
tcccgcctcaccaccccccagacttctgtcagcctagctgcaggccccggcctgtccaac
atggctgtgggcgacatgacatctatgcttacctctctggctggggagaataaatacctg
aacacactgtcttag
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integrated database retrieval system