Siniperca chuatsi (mandarin fish): 122863461
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Entry
122863461 CDS
T08948
Symbol
capn3b
Name
(RefSeq) calpain-3b isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122863461 (capn3b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
schu01002
]
122863461 (capn3b)
Enzymes [BR:
schu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
122863461 (capn3b)
Peptidases and inhibitors [BR:
schu01002
]
Cysteine peptidases
Family C2: calpain family
122863461 (capn3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Calpain_u2
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
DUF5363
Integrase_DNA
CCD97-like_C
Motif
Other DBs
NCBI-GeneID:
122863461
NCBI-ProteinID:
XP_044025925
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All DBs
Position
LG16:complement(18605843..18630163)
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AA seq
771 aa
AA seq
DB search
MGDKKYKGKVPLVEDTKVKVLYEIETSLGPDDKGDYPYAGTNSIYSAILSRNEAVKDAKR
LKTFLELRDKYVKKKVMFEDPLFPANDSSLFYSNKPSMKFEWKRPSEICENPQFIIDGAN
RTDICQGELGDCWLLAAIACLTLNEKLLYRVIPPDQSFTENYAGIFHFQFWRYGEWIDVV
VDDRIPTWNNHLVFTKSFRKNEFWSALLEKAYAKLHGSYEALKGGNTLEAMEDFTGGVTE
FFELSEAPKELYNIMRKALERGSLMGCSIDIFSASELETRTDHGLVRGHAYSIIGLAECD
EVAKDTRIRLIRLRNPWGLVLWKGPWSPNSKEWSTISIADKENLKKMTVEASEFWMSFDD
FKRNFTKLEMCNLTPDTLQGDERHSWTVSVNEGRWVRGSSAGGCRNFPHTFWTNPQYRLQ
LYEEDDDPEDGQVVCTVVVALMQKGRRMQRHQGAKFLTIGFSIYEVPKEMCGQNQHLQKD
FFLYTASKAKCKTYINLREVTERIRLPPGEYVILPTTFEPHQEGEFILRVFSEKQSTSEE
AENTIGSDQTQQNKKKKEKPIVFVSDRARANKEIEHDGIQGEKKKKPKRKVLKPEEETEE
EKQFRAIYQQIAGEDMQICANELKMVMKNALSKYNEIKTEGFSLETCRSMIALMDTDGTG
KLNLQEFKHLWEKIKAWQLIFKRYDKDKSCSISSFEMRNAVNDAGFHLNNQLYNIIAMRY
ADEHLNIDFDSYICCFVRLEGMFRAFDAFDIDGDGIIKLNVLEWLQLTMYS
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgggggacaagaaatataaaggtaaagtgcctcttgttgaagatacaaaggtgaaggtg
ctttatgaaattgaaacatccctcgggcccgatgacaaaggtgattacccttatgctggg
actaactcgatctactctgcgattctaagcagaaatgaggccgtcaaggacgccaagcgc
ctcaagacctttctggagctgcgagacaaatatgtgaagaagaaggtgatgtttgaggat
cctctgttccctgcaaatgactcctcgctcttctacagtaacaaaccttcgatgaagttt
gagtggaaacgtccctcggaaatttgtgaaaacccccagttcatcatagatggagccaac
aggacagacatctgtcaaggagaattgggtgactgctggctgctggccgccatcgcctgt
ctgacattgaacgagaagctgctgtacagagtgattcccccagatcagagcttcactgag
aactatgccggcatcttccatttccagttctggcgttatggtgaatggattgatgtggtt
gtggacgaccgcatccccacctggaacaaccatctggttttcaccaaatctttcagaaag
aacgagttctggagcgctcttctggaaaaagcttatgccaagttgcacggttcttatgag
gcactgaaagggggtaacactttggaagccatggaggatttcacaggaggagttacagag
ttcttcgagttgtccgaggcacccaaagagctctacaacatcatgaggaaggcgctggag
agaggctcgctgatgggctgctccatagatattttttcagccagtgaactggagactcgg
actgatcacgggctggtcaggggtcatgcctactccatcataggcctggcggagtgtgat
gaggttgcaaaggacaccagaattcgcctgattcgcttgcgcaatccctggggtttggtg
ctgtggaagggaccatggagtccaaattcaaaggaatggtcgaccatttccatcgcagac
aaggaaaacctaaaaaaaatgactgtagaggcgagtgagttctggatgtcttttgatgat
ttcaagaggaacttcacaaagctggagatgtgtaacctgacccccgacacactgcagggt
gatgaaagacatagctggacggtgtcggtcaatgagggccgctgggtgagaggcagctct
gctggcggctgcaggaacttcccacacacattctggaccaaccctcagtatcggctgcag
ctgtatgaggaggatgacgacccagaggacgggcaggtggtctgcactgtcgtcgtggct
ctgatgcagaaaggtcgaaggatgcagcgccatcaaggggccaaattcctcaccatcgga
ttttccatctacgaggtgccaaaggagatgtgtgggcagaatcaacatctgcagaaagac
tttttcctgtacacagcctccaaagctaaatgcaaaacctacattaacttgcgggaggtc
acagagcgtatccgtctacctccaggagagtatgtcatcctccccacgacctttgaaccc
catcaagagggagagttcattctcagggtcttctctgagaagcagagcacgtccgaggaa
gcggagaacacaatcggctccgaccaaacgcagcaaaacaagaaaaagaaagaaaagcct
attgtatttgtgtcagacagagcacgagccaacaaagaaatcgagcacgatggcattcag
ggggaaaagaagaagaaaccaaagcgaaaagtactcaaacctgaggaggagactgaagag
gaaaaacagtttagagccatttaccaacagattgctggtgaggacatgcagatctgtgcc
aacgaactcaagatggtcatgaagaacgcgctctccaaatataatgaaataaaaacagag
ggtttcagccttgagacatgtcggagtatgatcgctctgatggataccgacggtacggga
aagctgaacctgcaggagttcaaacacttgtgggaaaagatcaaggcgtggcagctgatc
ttcaaacgttacgacaaagacaaatcctgctccatcagtagttttgagatgaggaacgct
gttaatgatgcagggtttcacctcaacaaccagttatataacatcatagccatgcgctac
gcagacgaacacctcaacatcgactttgacagttacatctgctgttttgtgaggctagag
ggcatgttcagggctttcgatgcctttgacatagacggagatggaataatcaagctcaat
gtcctggagtggcttcagctgaccatgtattcttaa
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