KEGG   Siniperca chuatsi (mandarin fish): 122863492
Entry
122863492         CDS       T08948                                 
Symbol
trub2
Name
(RefSeq) mitochondrial mRNA pseudouridine synthase TRUB2
  KO
K23497  mitochondrial mRNA pseudouridine synthase TRUB2 [EC:5.4.99.-]
Organism
schu  Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:schu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:schu03029]
    122863492 (trub2)
Mitochondrial biogenesis [BR:schu03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    122863492 (trub2)
SSDB
Motif
Pfam: TruB_N TruB_C_2 PseudoU_synth_2 TetR_C_32
Other DBs
NCBI-GeneID: 122863492
NCBI-ProteinID: XP_044025986
LinkDB
Position
LG2:complement(16456906..16460742)
AA seq 361 aa
MDGPWTCCGFKEGSVLIQVSQNLDDLMATPAIRMFRKLEGLFCVYKPSGVHWKLVRDSIE
TNLLKGLNATPSQPVPQEVRFLAHPSSETGAPKGLTLSAASVPVLSKHPLVTGPEFMRIR
VGVGHRLDTFSSGVLVLAVGNGNKALNDLYRTRVTRDYTLEGEFGTATDDSSHTGRVMER
STYGHITQDKLDRVLAMLQGANQKALLMYSNVDMRSQEAYEMAVHGLLGPEGKSLPVLTG
LRCTHFQPPIFTLEVQCLNETQKYLRKVVHEIGLELRSTAVCKGVRRTRDGPFTLQDALT
HHHWTASDVTQAIRQYHSSKQKQKNSHTRIKDPEIQPAEENTPTASQQNDTSDKAAVGRI
K
NT seq 1086 nt   +upstreamnt  +downstreamnt
atggacggaccatggacttgttgtggcttcaaggagggatctgttttaattcaggtgtcc
caaaatctggatgacctgatggcaactccagctattcggatgtttcggaagttagagggt
ctgttttgtgtgtacaaaccctctggtgtccactggaaactcgtacgggacagcatcgag
acaaatcttctgaaaggtttaaacgctacaccgtcccagccagttcctcaggaggtccgc
ttcttggcacacccaagcagtgagactggagcacccaagggactcacactgtcagcggcc
tctgtgccagtactgtccaagcatcctctggtgactggacctgaattcatgcgtattcga
gttggagtaggacatcgcctggatacattctcttctggtgtcctagttcttgctgttgga
aatggaaacaaggccctgaatgatctctacagaacacgagtcacaagggattacacattg
gagggtgaatttgggactgctacagatgattcctctcacacaggaagagttatggaaagg
tccacatatggtcacatcacacaggataagctggacagagtcttggcgatgctgcaggga
gccaatcaaaaggccttgttaatgtattccaatgtagacatgcgctcgcaggaagcctat
gagatggctgtgcacggtttactgggtccagaggggaaatcgctgcctgttttgacaggc
ttgcgttgcactcactttcagccccccatcttcactttagaggtgcagtgtctaaatgaa
acgcagaaatatttgcgcaaagttgtgcatgagataggactcgagctgcgcagcacagca
gtgtgtaaaggagttagacggaccagagacggccccttcaccctgcaggatgccctgacc
catcaccactggactgcttctgatgttacacaggccatcagacaataccactcctctaaa
caaaaacaaaaaaactcccacacacggatcaaggacccagaaatacaaccagcagaagag
aatacaccgacagctagtcaacaaaatgacaccagtgacaaagcagcagtaggtagaatt
aaatga

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