Siniperca chuatsi (mandarin fish): 122863681
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Entry
122863681 CDS
T08948
Symbol
hnrnpub
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein Ub
KO
K12888
heterogeneous nuclear ribonucleoprotein U
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122863681 (hnrnpub)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
schu03041
]
122863681 (hnrnpub)
Spliceosome [BR:
schu03041
]
Common components
Common spliceosomal components
hnRNP proteins
122863681 (hnrnpub)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_33
SPRY
SAP
CPT
AAA_17
AAA_22
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
122863681
NCBI-ProteinID:
XP_044026331
LinkDB
All DBs
Position
LG16:7321147..7332000
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AA seq
811 aa
AA seq
DB search
MSSINVKKLKVNELKDELKKRNLSDKGLKAELMDRLQAALDEEALAGDSPLDQEAAAGEG
FGQAADQEGMGEEEEGEGPIEESMEANEEEGEEEEPENGGDGGGVAEDEEMGEGEEDGDG
DGDEEDEMDPMLKGDVDDMEKIDAEDGEPGDQAAEGDADKDTNADQKNKKGVKRRREEHG
RGYFEFIEENKYSWASFKSPVPPLEEEDEEFDDTKVCLDAYNCDLHFKVSRDRYSASSLT
MESFAYLWSGGKATYGVNKGKACFEMKITEKIPVKHITSKNMEIHDVQVGWSLATGTLLL
GEEEHSYAYSGKGKKTTNCVTEDFGETYEENDVICCLIDFEGEELALSFSKNGGEPAVAF
QVSKDTLNGQALFPHIICHNCAVEFNFGQMETPYFPQPQGYTFLQQIPVSERVRGLKGPQ
TKADCEIIVMVGLPGSGKTTWVKNHVQENPGKYYILGSDTIVDKMMINSLKRQSKDITKL
TAISQRAPLFLGKFIEIAARKKRNYILDHTNLSAPGQKRKMCLFAGFQRKAVVVCPSDND
YKQRVQQKVESDGKEVPEHAVLKMKGFYSLPEEGESFSEVIYAELQKEEAAKLLEQYKEE
SKTALPAEKKPNQGSTTPKRGGGLRGGGRGGKNQFSRGGGPGQRGGGRGGFQNRGNFRGA
PGPRGSFNRPPRGFLPPPAFRGGFPNRGNFNRGGPIPSLGGSPRGGPMRGNMGPRGGAMN
RGGPMHRGSMTRGGGASMNRGGNRGHPSQFQPRGGHRGNFGNKNGNFGNNRNSGNFGNRN
GMDKAQAFNQSWQQGFWNQKPWSQQYQPGYY
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgagctcaattaacgtcaaaaagctgaaagttaacgagctgaaggacgagctgaaaaag
cgtaatctttcagacaaggggttgaaggccgagctgatggaccgcctgcaggccgcgctg
gacgaggaggcccttgccggagactccccgctggaccaagaagctgcggctggtgagggt
ttcggccaggccgctgaccaggagggtatgggagaggaagaagagggcgagggcccgatc
gaggaaagcatggaggccaacgaggaggagggggaggaagaagagccggaaaatgggggc
gacggcggtggcgttgccgaggacgaagagatgggtgagggggaagaggacggggacggg
gacggggacgaggaagatgagatggacccaatgctcaagggagatgtggacgacatggag
aaaatagacgcagaggatggtgagcccggggaccaggctgctgagggggatgcggacaaa
gacacgaatgctgatcagaagaataagaagggtgttaagagacgccgggaggaacatgga
aggggctactttgaatttattgaagagaacaaatacagctgggcctcatttaagtctcct
gtgccacccctggaggaagaagatgaggagtttgatgacacaaaagtctgcctggatgcc
tacaactgcgacctacactttaaggtgtcacgagaccgttacagtgcctcatctctcaca
atggagagttttgcttacctgtggtctggaggcaaggccacctacggcgtgaacaaaggc
aaagcctgctttgagatgaagatcacagagaaaataccagtaaagcacattaccagcaag
aacatggagattcacgatgtgcaagtcggctggtccctggctactggcaccctgctcctg
ggtgaggaggaacattcttatgcgtattctgggaaaggcaagaagaccaccaactgtgtg
acggaggactttggagaaacctatgaggagaatgatgtcatctgctgccttattgacttt
gaaggtgaggagttggcgttgtccttctccaagaatggcggggagccggctgtcgctttc
caggtcagcaaagacactctgaacggccaggcccttttcccccacatcatctgccacaat
tgtgctgtagagttcaactttggccagatggagactccgtacttccctcagccccagggc
tacaccttcctgcagcagatccctgtgagtgaacgagtccggggtctgaaggggccacag
accaaggctgactgcgagatcatagtgatggtcggcctgccaggctcagggaagactaca
tgggtgaagaaccatgtccaggagaaccctgggaaatactacatcctgggcagtgacacc
attgtggacaagatgatgatcaacagcctgaaacgccagtcaaaggacattacaaaactg
actgccatttcccagcgagcaccacttttcttgggaaagtttattgagattgctgcccgc
aagaagagaaactacatcctggatcatactaacctgtctgccccaggccagaagaggaag
atgtgcttgtttgcaggtttccagcgcaaggctgtggtggtctgcccctctgacaacgac
tacaagcagagagtccagcagaaggttgagagtgatggcaaagaagtgcctgaacatgct
gtcctcaaaatgaaaggcttctactctctgcctgaggagggagagagcttcagtgaggtc
atctatgctgagctgcagaaggaggaggctgccaagctactggaacagtacaaagaggaa
agcaagacagctctgccggctgagaagaaacccaaccagggaagcacaacaccaaaaaga
ggcggcggtctgcgtggtggtggccggggaggcaagaaccagtttagccgcggcggtgga
cccggacagagaggtggtggccgtggaggcttccagaacagaggcaactttagaggagct
cctggccctcgtggcagcttcaaccgtccacctcgcggcttcctgcctcccccagccttc
agaggagggttccccaaccgcggaaacttcaatcggggtggccccattcccagcctgggc
ggatcccccaggggcgggccaatgaggggtaacatgggacccagagggggggccatgaac
agaggtggcccaatgcacagagggagcatgaccagaggaggtggagccagcatgaatcgt
ggtggaaacaggggacatcccagccagtttcagccgagaggtggtcaccgtggcaacttt
ggcaacaagaatggcaactttggtaacaacaggaacagtggcaactttggcaacaggaat
ggcatggacaaggctcaagccttcaaccagagctggcagcaagggttctggaaccagaag
ccgtggagccaacagtatcagcctggatattattaa
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