Siniperca chuatsi (mandarin fish): 122863828
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Entry
122863828 CDS
T08948
Symbol
sdc2
Name
(RefSeq) syndecan-2
KO
K16336
syndecan 2
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04514
Cell adhesion molecules
schu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122863828 (sdc2)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122863828 (sdc2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
schu04090
]
122863828 (sdc2)
00535 Proteoglycans [BR:
schu00535
]
122863828 (sdc2)
CD molecules [BR:
schu04090
]
Proteins
122863828 (sdc2)
Proteoglycans [BR:
schu00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
122863828 (sdc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
Glycophorin_A
DUF2721
MtrF
Cadherin_C_2
Dsc3_C
Motif
Other DBs
NCBI-GeneID:
122863828
NCBI-ProteinID:
XP_044026544
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All DBs
Position
LG17:8970005..9016764
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AA seq
213 aa
AA seq
DB search
MRNVWIILTLGLTVFLSGETIAEAAKTSSEADDLYLDDTGSGGYYPEDDDDFNSGSGSGG
GEEVLEETVTVSMVYIEPNAAEPTQDSTKDFTPRVETATVREKARDSTPRKPLRTEAPVP
VTEDMQRNQMTSTTSAPGSPQEAIEVRTENLFQRTEVLAAVIAGGVIGFLFAIFLILLLV
YRMRKKDEGSYDLGERKPSSAAYQKAPTKEFYA
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgaggaacgtgtggataattttgaccctcgggctgaccgtcttcctctccggggaaacg
atagcagaagcagcaaagacttcctctgaggctgatgacttgtacctagatgacacaggc
tcaggaggttactaccctgaagatgatgatgactttaactcagggtctggctcaggtgga
ggtgaagaagtgttggaggaaacagtgactgtcagtatggtttatattgagcccaatgca
gcagaacccacccaggactccaccaaagatttcacccccagggtggagacagccacggtc
agagaaaaggccagggacagcacacccaggaaaccactcagaaccgaggcaccagtgcca
gttacagaggacatgcagaggaaccagatgaccagtacgactagtgcccccggctcaccc
caggaggccattgaagtccgcactgaaaacctatttcagaggacagaggtgttggcagct
gttatcgcaggtggcgtgattggcttcctgttcgccatcttcctcatcctcctcctggtc
taccgcatgaggaagaaggatgagggcagctatgacctgggagagaggaaaccctccagt
gcagcctatcagaaggccccaaccaaggagttttatgcataa
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