Siniperca chuatsi (mandarin fish): 122863968
Help
Entry
122863968 CDS
T08948
Symbol
arid1ab
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122863968 (arid1ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schu03000
]
122863968 (arid1ab)
03021 Transcription machinery [BR:
schu03021
]
122863968 (arid1ab)
03036 Chromosome and associated proteins [BR:
schu03036
]
122863968 (arid1ab)
Transcription factors [BR:
schu03000
]
Eukaryotic type
Helix-turn-helix
ARID
122863968 (arid1ab)
Transcription machinery [BR:
schu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
122863968 (arid1ab)
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
122863968 (arid1ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
122863968
NCBI-ProteinID:
XP_044026838
LinkDB
All DBs
Position
LG17:complement(23112139..23163171)
Genome browser
AA seq
2306 aa
AA seq
DB search
MAAQVASVATLNTSPPSELKKPDRDPQEESVPGEKQHENKEPGPDGGSPGQKELQDGADA
GNAGGGGDPDMKNGNGNLPRVNNNSSNQNDTGGPEGNNHPGMGHHHPGPFPPPPYGYNQH
YSRAPFHQHGGQQSPGMAAASGPGMMDPYPPNSHEHGYPNHYNNYSPFQNRTSYQGQGYG
AMNSPRNNQPPAAGGQPGKQQPAGGTTAMAASYNNQRYNMGNQQPTSTPTLNQLLTSPSS
ARSYPNYPQGDYNNQEGANKGPGDMGSSQYGGVHPGWQQRTHHPPPMSPGNTGQPPNRNQ
PSSPMDQVGKIRVQPYGGPNPYSQQQQGPPPTGPGPQQGGSYPGQGYGPPGPQRYPMAMQ
SRTPGAMGSMQYGQQMSAYGQQGPGGYSQQSQGYYGQHGPAPHPGQQQPPYPGQPQGSSG
TPYPQQGHPSQPPGQHGQPGTPYQQSQGPHGPAPGQPPFSQPPQSQPGQPPYVPPQQQQP
PQQQQGPGPQTQQGPQGQPGYPQPPGPGQPPQQQTPQQQQQQQQQPQQQQGPPQQQQQQQ
QQTGGPPPQAQQPPGHGQQGQPSPYSQTPPLQQQQQQQQQQQQQQQQQQQQQQSPYQRFP
PPPQELSQDSFSSQSSAPPSNQPMASNKSSQEDSMQARPSSLPDLSGSIDDLPTGTEGAL
SPGVSTSGVSSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVTPSRTGPLSPA
AVPGNQMPPRPPSVQSDSIMHSSMNQSAMGQDRVYMRNPQMPPYGSPGQPGSALSPRQSS
GGQIHSGMGPYPQNNSMGNYGPQGGQYGPQGYPRQPGYTGMPNANYPSGPGMGGSMNPMP
GQGSGAPYGTIPPGRIGPGQMGARPYGPAMGSNMGGMPPQVGSGMCPPPGMNRKDGGPSM
HHGPTNSIHNRPPGYPNMSQGMMGAGPPYGPGMNSMHGMMNQPGPGPYPMGANMANNTPG
MAPSSEFGMDKMNPAQKMNNKVEGTPKQESTKKKSSSSTITNEKITRLYELGPEPERKMW
VDRYLAFAEEKAMGMNNLPAVGRKPLDLFRLYVSVKEIGGLTQVNKNKKWRELATNLNVG
TSSSAASSLKKQYIQCLYAFECKIERGEDPPPDFFNTDTKKNQPKIQPPSPAGSGSLQGP
QTPQSTSSSMAEGGDLKPPTPASTPHTQMPPMPGRSSVNLQDPFADGGDPAFSRRNAMTP
NSQGYQPGMGGPEMMGRMGPYESNKDPFGGMRKAGEQFMQPGPNSGMGEQYNRGPPGPMG
NMQMGQRQQYPYGYDRRQEPGMGPDGSMGPGAPQPNMMPSGADTGMYSPSRPPPQQRHDS
YTNQFPGQGAPPGGPYPNQQPGMYPQQQPNYKRPVEGGYGPPAKRHEGEMYNVPYSGQQQ
PGPQSSGPQGQQDMYNQYNAYPGGDRRPPGPQNQFPFPFGRDRGPSSAGPNSQSPMPPQM
MASPMPSGPDGPQGPMWQGRNEMGYPNYPNRQGPPVPGQGPGYHGMNRSEEMMPSDQRMN
HEGQWPGHVNQRQPPFGPGGSGPPMTRPLPSTYQTSQNHIPQVSSPAPMPRPMESRTSPS
KSPYMHPGIKVQKAGPPVPASHIGQAPVQQPMIRRDVAFPPGSVEASQPHLKPRRRLTMK
DIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSISTFNLCQLPGFLELVVEYFRR
CLIEIFGILKEYEVGDPGQRTLIDPNAAEDSDDEIPMPEGEEVDMDEEDEEDEEVEETKA
NPDLSSLVQVKQEEESSRKHKSSEDEEEEKERESSIKEPNTSTSGSSQDPNLHSEKPKQA
SKFDKLPIKVVRKKNPFLVNHSSKLGQRQSFDSGLIHWSIGGGDTTEHIQTHFESRMDLL
KQRKRTPTATESRKKVQVTETVTENPEKSKSNGEDKPRQQQPQSSEPQKSPAAKTPPPLP
IGAPVTATIDDVLSARPGSVTEEVVRGGAEEQKENGKYLFSINPDLQSRRNIKILEDEPH
SKDETPLSTLSDWQDSLARRCICVSNIVRSLSFVPGNDLEMSKHPGLLLLLGRLVLLHHR
HPERKQAPVTYEKEEEEDEGVSCERDEWWWDCLEVLRENCLVTLANISGQLDLSIYPESI
CLPLLDGLLHWAVCPSAEALDPFPTLGPHGSLSPQRLVLETLSKLSIQDNNVDLILATPP
FSRLEKLYGSLVRLVGERKVAVCREMAVVLLANLAQGDSLAARAIAVQKGSVGNLLGFLE
DSLAATQYQQSQSSLLQMQGAPQFEPTSVDMMRRAARALHALAKVEENHSEFTLYESRLL
DISVSPLMNSLVSQVICDVLFLIGQS
NT seq
6921 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtcgccagcgtcgccactctcaacactagcccgccatccgaactcaaa
aagccggatcgggacccacaggaggagtcggtaccgggagagaaacagcatgaaaataag
gaaccgggacctgacggcggatctcctggccagaaggagctgcaggacggggccgatgct
ggaaatgctgggggaggaggggatcctgacatgaagaacggcaacgggaatttgcccagg
gtaaataataatagcagtaatcagaatgatacaggcgggcccgaagggaataaccatccc
gggatgggacaccaccacccgggcccctttcctccacctccttacggttacaaccagcac
tacagccgggccccttttcatcaacatggcggacaacaaagccctggcatggcagctgca
tcggggccgggcatgatggacccttacccccctaattcacacgaacacggctaccccaac
cattataacaactacagcccgttccagaacaggacttcttatcagggccaaggatacggg
gccatgaattccccgcgtaacaaccagcctccggcggctggggggcagccaggcaagcaa
cagccagcaggaggaaccacagctatggctgcctcgtacaataatcagaggtataacatg
ggaaaccaacaacctacgtctacgccaactttaaatcagcttttgacatcccccagctct
gccaggagctacccgaattacccccaaggagactataacaatcaggaaggggccaataag
ggaccaggagatatgggcagcagtcagtatggtggggtccatccgggttggcaacaaagg
acccaccatccgcctcccatgagcccgggaaacactggacagcctccaaacagaaatcag
ccttcaagcccaatggaccaggtagggaagatacgtgtccagccatatggaggacccaac
ccctactcccagcagcagcaagggcctccccccacagggcctggaccccagcagggaggc
tcttacccagggcagggctacggacctccaggccctcagaggtatccaatggctatgcag
agccgaacacctggcgctatgggcagcatgcagtatggacagcagatgtcagcctatgga
caacaggggccaggtggctacagccagcagagccagggctactatggtcagcatggcccc
gcccctcaccctggccaacagcagcctccgtatcctggccaaccccagggcagctctgga
actccctacccccagcagggccacccttcgcagcctcctggccagcacgggcagccagga
accccctaccaacaatcccaaggtccccacggccctgctccgggtcagcctccctttagt
cagcccccacagtctcagccaggacagccgccctacgtccctccccagcagcagcagccg
cctcaacagcagcagggacctggtccccaaactcagcagggccctcagggccagcctggc
tacccacaaccccctggaccagggcagccaccacagcagcaaaccccgcagcagcagcag
cagcagcagcagcagccgcagcagcaacaagggcccccacaacaacagcagcaacaacag
caacaaacaggaggtccacctcctcaagcccagcaacctccaggtcatggccagcagggt
caaccatctccttactcccagacaccccccctgcaacagcaacagcagcagcagcagcag
caacaacaacaacaacaacagcaacagcagcagcaacagtcaccatatcagaggttccca
cctcctccacaggaactgtcccaggattcctttagctcccagtccagcgctcctccttcc
aaccagcccatggcttccaacaagagcagtcaagaagacagcatgcaggcccggccatcc
agtctgccggatctgtcgggctccatcgatgacctgcccactggtacagagggggccctg
agcccgggcgtcagcacctcaggggtatccagcagtcagggtgagcagagcaatcccgcc
caatcgcccttctctccgcacacttcgccccacctgccaggcatacgtgggccctcgcca
tcacctgtgggttcccccgccagcgtcaccccctcccgcaccggccccctgtctcctgct
gctgtgccaggtaatcagatgcctccccggccgcccagcgtccagtcggacagcatcatg
cactcttccatgaaccagtcagccatgggccaggacagggtgtacatgcgtaaccctcag
atgcctccttacgggtcccctggacaacctggttccgccttatctccacgccagtcttcg
ggaggccagatacatagtgggatgggaccctatccccagaacaactccatgggaaactac
gggccacaggggggccagtatggtcctcaaggttaccccaggcagcccggctacacaggg
atgcccaatgccaactaccccagtggtcccggcatgggcggctccatgaaccccatgcct
ggtcagggcagcggggctccgtatggaaccatcccacctggcagaataggcccagggcag
atgggtgctcggccctacggtcctgcgatgggctccaacatgggcggcatgcctcctcag
gtggggtccggaatgtgtcctcctccaggcatgaacagaaaggatggcggcccctccatg
caccacggacctacaaactccatacacaacaggccacctggctaccctaacatgtcccag
ggcatgatgggagcaggccctccatatggccctggcatgaatagcatgcacggtatgatg
aaccagccagggccagggccatatccaatgggagcaaatatggctaacaacacccctgga
atggctcccagttcggagtttggcatggacaaaatgaaccctgcccagaagatgaacaac
aaagtggaagggactcccaagcaagaatctaccaaaaagaagtcgagctcttccaccatc
accaacgagaagatcactcgtctgtacgagcttggcccagagccagagaggaagatgtgg
gtggatcgatacctagctttcgctgaggagaaggccatgggcatgaacaacctgcctgct
gtgggacgcaagcctctcgatctcttcagactctatgtgtccgtcaaagagatcggcggc
ctcacccaggtgaacaagaacaagaagtggagggagctggccaccaacctgaacgtgggc
acgtcgagcagcgccgccagttcgctcaagaaacagtacatccagtgtctgtacgccttt
gagtgcaagatcgagcgtggtgaggacccgcccccggacttcttcaacacagacaccaaa
aagaaccagccgaagatccagcctccaagcccagctggttccggatccctgcaaggaccc
cagacccctcagtccaccagtagttcaatggcagaggggggagacctgaagccccccacc
ccagcctccaccccgcacacgcaaatgcctccaatgcctggcaggagtagcgttaatctg
caagacccctttgctgatggcggagacccagcgttttccagaaggaatgccatgactccc
aactcgcagggctaccagcctgggatgggtggcccagagatgatgggtcgaatgggtccc
tacgagtccaacaaggacccatttggtggcatgaggaaagccggagagcagttcatgcaa
ccaggccccaacagtgggatgggagaacagtataacagaggcccaccaggccctatgggc
aacatgcagatgggccagaggcaacagtacccttacggatatgaccgaagacaggagcca
ggcatgggtcctgacggcagtatgggaccaggagctcctcagcctaacatgatgccttct
ggagccgacacagggatgtactcgcccagccgccctccaccacagcaacggcatgactcc
tataccaatcagttccctggccaaggagctccccctggtggcccatacccaaatcaacag
ccaggaatgtatccacagcagcaaccgaactacaagcgtcctgtagagggagggtacggt
cctccggccaagcgccatgagggagaaatgtacaacgtcccctacagtggtcagcagcag
ccaggaccccagtcctctgggccacagggccaacaggacatgtataaccagtataatgca
taccctggaggggatcgcagaccaccgggcccacagaaccagttccccttccccttcggc
cgggaccgaggaccgtcatctgcaggccccaactcccaatctccaatgcctccccagatg
atggcaagccccatgccttcaggtcccgatggcccccagggcccaatgtggcagggccgc
aatgagatgggctaccccaactatcccaaccgacagggacctcctgtaccaggccagggc
cccggctaccacggcatgaaccgctcagaggagatgatgccgtcagaccaacgcatgaac
cacgagggtcagtggcccggccacgtcaaccagcgacagccaccgtttggccccggtggt
tctggacctcccatgaccagacccctgccatccacctaccagacttcccagaaccacatt
cctcaggtgtcgagcccagcacccatgccccggcccatggaaagcaggacgtcacccagc
aagtccccttacatgcatccgggcattaaggtgcagaaagctggacccccagtacccgcc
tcccacattggccaggcccctgtgcagcaacccatgatcaggcgagatgtggccttccct
cctggctctgtggaggcctcccaaccccaccttaagccccgcaggcggctcaccatgaaa
gacattggcactcctgaggcttggagagtgatgatgtctctaaagtcaggcttactagct
gaaagcacctgggccctggacaccattaacattttactttatgatgacaatagcatttct
acttttaacttatgccagctgcctggattcctggagctggtggtggagtacttcagacgc
tgcctcatcgagatctttggcatcttaaaggagtacgaagtaggagaccccggccagcgc
accctcatagaccccaacgctgctgaggactctgatgatgaaattcccatgcctgagggc
gaggaggtggacatggatgaagaggacgaagaggatgaggaggtagaggaaacaaaggcc
aatcctgacctctcctcactggtccaggtgaaacaggaggaggagagctcacggaaacac
aagtcttcagaggacgaggaagaggagaaggaaagggagtcctctatcaaggaacccaat
acctctacctcagggtcctcccaggaccccaacctccactcggaaaagcccaagcaggct
agcaagtttgataaactccccatcaaggtggtgcggaagaagaatcccttcctggtgaac
cactcgtccaagcttgggcagcggcagagctttgatagtggcctaatacactggagcatt
ggtggtggtgacactaccgaacacatccagacccactttgagagccggatggaccttctc
aagcagcggaaacgcacaccaacagccactgagagtcgcaagaaggtccaggtgactgag
acggtgacggaaaaccctgagaaatccaagtccaacggggaagataagcctcggcagcag
cagccccagtcttcggaacctcagaagtctccagcggcgaagacccctcctcctcttccc
attggtgcaccagtcactgccaccatcgatgatgtactatctgcccggccagggtcggtc
acagaggaagtggtccgtggaggcgccgaagagcaaaaagagaacggcaagtacctgttc
agcatcaaccctgacctccagagccgacgcaacatcaagatcctggaggacgagcctcac
agcaaggacgaaacgccgctcagcactctgtcagactggcaggactcactagctcggcgc
tgcatctgcgtttccaacatagtgcgcagcctctccttcgttcccgggaacgacctggag
atgtcgaaacacccaggcctcctgctgctgctgggccgcctggtgctgctccaccacagg
caccccgaacgcaaacaggcgccagtcacctatgagaaggaggaagaggaagatgaaggc
gtgagctgcgagagagatgagtggtggtgggactgcctcgaggtgttaagggaaaactgc
ctggtcactctggcgaacatctcaggccagctggacctttctatctacccagagagtata
tgcctgccgctgctggatggcctgctccactgggctgtctgcccctcagcagaggccctg
gaccccttccccacgctggggccccacggctcactttccccccagagactggtccttgag
accctcagcaagctcagcatccaggacaacaacgtcgacctcattctggcaacgccaccg
ttcagccgcttggagaagctgtacggctcgctggtgcgcctggtcggtgaacgcaaggtg
gccgtttgccgggaaatggcggtcgtcctgttggctaacttggcccagggtgacagccta
gcggcgcgggctattgctgtgcagaaaggcagcgtgggtaaccttctgggcttcctggag
gacagcctagctgccacacagtaccagcagagccagagctccttgctacaaatgcagggt
gcacctcagtttgagcccaccagtgtggacatgatgcggcgggcagcccgagccctgcac
gccctggctaaggtggaggaaaaccactcggagttcactttgtacgagtcgcggctactg
gacatctcagtgtccccacttatgaactctctggtgtcccaagtgatctgtgatgtactg
tttctgattggccagtcatga
DBGET
integrated database retrieval system
