Siniperca chuatsi (mandarin fish): 122863970
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Entry
122863970 CDS
T08948
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 1 isoform X1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04145
Phagosome
schu04814
Motor proteins
schu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122863970
09142 Cell motility
04814 Motor proteins
122863970
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
122863970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
schu03036
]
122863970
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
schu04812
]
122863970
Chromosome and associated proteins [BR:
schu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
122863970
Cytoskeleton proteins [BR:
schu04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
122863970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynein_IC2
WD40_CDC20-Fz
WD40
Beta-prop_EML
WD40_Prp19
WDR55
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_NUP159_NUP214
WD40_RFWD3
Beta-prop_SPT8
DUF3102
Big_2
Motif
Other DBs
NCBI-GeneID:
122863970
NCBI-ProteinID:
XP_044026849
LinkDB
All DBs
Position
LG17:17316227..17371083
Genome browser
AA seq
674 aa
AA seq
DB search
MSDKSDLKAELERKKQRLAQIREEKKRKEEERKKKEVRKKSESQQKREMTPEDSDLDRKR
RETEALLQSIGISPEPPLVHSLQPLMLDSCYFHYLVPTPVSPSKSVSTPSETGSQDSADG
GAASRFYQLDFTNWSGFSKNKSQAQSSRTLQWDTDPYVLQLQADSELGRRMQRLGASKIT
QVDFLPKELVSYSKETQTPLTAHLSEVEEEEEDEEMMEVKPGPESEQQDEDDNRETKEGL
VLRELTEEERQQILHSSEFQSFFDCSIRVMERALAEDSNIFFDYSGRDVEDKEGDLGSGS
SLSFSRLFYDEHWSKHRVITCLDWSPQYPELLVASYNNNEDAPHEPDGVALVWNIKFKKN
TPEYIFHCQSPVVSVGFARFHPNLVVGGTYSGQIVLWDNRSHRRTPVQRTPLSAAAHTHP
VYCVNVVGTQNANNLITVSTDGRMCSWSLDMLSQPQETMELVYNKSKPVAVTGMAFPTGD
VNNYVVGSEEGTVYTASRHGSKAGICEMFEGHQGPVTGISCHSAVGTVDFSHLFITSSFD
WTVKLWSTKHNKPLYSFEDNADYVYDVMWSPIHPAIFAAVDGMGRLDLWNLNNDTEVPTA
SVTIEGASALNRVRWSSGGKEVAVGDSEGRVWIYDTGELSVAHTDDWGGFARTLMEIRAN
RADGEEEGPMELAS
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacaaaagtgacctaaaagcagagctggagcgcaagaagcagcgcctcgcccaa
atcagggaggaaaaaaagagaaaggaggaggagaggaagaagaaagaggtaaggaaaaaa
tcagagagccagcagaagcgagagatgaccccagaggattcagacttggaccgtaagcgc
agggagactgaggccctgctacagagtattggcatctcaccggagcctcctctggtccat
tctttgcagcctttaatgttagattcatgttattttcattatttagtcccgacccctgtg
tccccctccaaatcagtgagcacgcccagtgagacagggagccaggattcagctgacgga
ggagcagctagcagattttaccaattggattttacaaattggtcaggtttctctaaaaac
aagtcccaagcacagagctcaaggacactgcagtgggacacagacccctacgtgctgcag
ctgcaggctgattctgagctcgggcgcaggatgcagaggctgggcgcctctaagatcaca
caggtagacttccttcccaaagagttggtctcttacagcaaggagacacagacgccactc
accgcccacctgtctgaagtagaggaggaagaggaagatgaagagatgatggaggtgaag
ccaggccccgagtcagagcagcaggatgaagacgacaacagggaaaccaaagaaggcttg
gtgctgcgggagctgacggaggaggagaggcagcagatcctgcactcttctgagtttcag
agtttcttcgattgcagcatccgggtgatggagagagctctggccgaagacagcaacatc
ttcttcgactacagcggccgggacgtggaggacaaagagggagacttgggtagtggctcc
agcctgtccttcagtagactcttctacgatgaacactggtcgaaacatcgcgtgatcacc
tgccttgactggtcccctcagtatccagagttgctagttgcctcctataacaataacgaa
gatgctcctcatgaaccggatggtgttgcccttgtatggaacatcaaatttaagaagaac
acaccagagtacatctttcactgtcagtctcctgtagtatctgttggctttgccaggttt
catcccaacctggtggtgggggggacttactcgggacagatcgtcctgtgggacaaccgc
agtcaccgtcggacccccgtccagaggactcctctgtctgctgctgcacacactcaccca
gtgtactgcgtgaacgtggttggcacccagaacgccaacaacctgatcactgtgtctaca
gatggcaggatgtgctcctggagtctggacatgctctcccagccacaggagaccatggaa
ctggtgtacaataaatccaaacccgtggcggtgacaggcatggctttccccacaggagac
gttaacaactatgtagtggggagtgaggagggcactgtgtacactgcatccagacatggc
agtaaggcgggcatctgtgagatgttcgagggccaccaggggccggtgacgggcatcagc
tgccacagcgcagtgggcaccgtcgacttttcccacctcttcatcacatcctccttcgac
tggaccgtcaaactctggagcaccaagcacaacaagcctctgtactcgtttgaggacaac
gcagactatgtgtatgacgtcatgtggtcgcccatacaccccgcgatcttcgccgccgtg
gatggcatgggccgcttagacctgtggaacctcaacaatgacactgaggtaccaactgcc
agtgtgaccattgagggcgcttcggccctcaacagggtccgctggtcgtcaggagggaag
gaagtggctgtgggcgactcagaaggccgagtctggatctacgatactggagagctgtcg
gtggctcacactgatgactgggggggctttgctcgtaccctgatggagatccgtgcgaac
cgggcggacggcgaggaggaggggcctatggagctggcttcatag
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