Siniperca chuatsi (mandarin fish): 122863975
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Entry
122863975 CDS
T08948
Symbol
cdh4
Name
(RefSeq) cadherin-4 isoform X1
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122863975 (cdh4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
schu04515
]
122863975 (cdh4)
Cell adhesion molecules [BR:
schu04515
]
Cadherins
Major cadherins
122863975 (cdh4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_4
Stevor
DUF5527
Motif
Other DBs
NCBI-GeneID:
122863975
NCBI-ProteinID:
XP_044026884
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All DBs
Position
LG2:complement(25886296..26075011)
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AA seq
989 aa
AA seq
DB search
MGTGFLWTERSISVSAALLRQTSRDGLSLSTQEEETGLRELLRCIWQRRLISFPFFLTLG
FAKMNVGCVILACTLLVGASSGSKAVQPLKPPCRPGFSQNFYTVIVSRDVLHGQSILKDT
TLSSERVKFEDCQRSREVGFVSNDPNFSVRPDGTVYAEQDLANLSEPVQFMVTARGLHDP
HIWETTVKLALAGHPHPLALTKVEEMLSRVWDSQPRVIRFPRKHQRSSSANGLRRQKRDW
VIPPINVPENSRGPFPHMLVRIRSDQDKDVGIRYSITGAGADQPPNGIYNIDPISGNMFV
TQPLDREERASFHLRAHAVDMNGNQVENPIDLYIYVIDMNDNRPEFQNQVYNGSVAEGSK
PGSSVMQVTATDSDDSTTANGMVRYRILSQTPHSPIPNMFTINSETGDIVTVAAGLDREK
VSQYTIIVQATDMEGNLNFGLSNTATALISITDINDNPPELTVRTFSGEVPENKVNVVVT
NLTVVDRDQPHSPNWNAVYRIVSGDPSGHFTIRTNPITNEGMLTVVKPVDFEMNRAFMLT
VVVSNQAHLASGIQSSLQSTAGVTISVQDVNEPPVFPVNPKTIRFEEGVPAGTTLTVFAA
QDPDHFIHQIVRYSKLSDPANWLKINRTNGQITTMALLDRESMYVRNNVYEATFLAFDNG
KSGSPQASGTGTLQIYLIDVNDNAPVLIPREAQVCERARPNSRINITASDADADPNVGPF
VFELPSFPASVRRNWTISRLSGDYAQLRLRIPYLEAGVYGIPIIVSDSGNPPLSNRSVIR
VKVCPCDDNGDCSATGAVAAAGLGTGAIIAILICIIILLSMVLLFVVWMKRREKERQAKP
LLIDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPESLDHIINKPAGVRRVDERPVIAE
SQYPVRPSLPHPGDIGDFINDGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLNSTS
SGDQDYDYLNDWGPRFKKLADLYGGGDDD
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccggcttcctctggacggagcgcagcatctctgtctcagcggcacttttgcgc
cagacaagtagggacggtctctcactcagcacccaagaagaagaaacagggctccgggaa
ttactgaggtgtatttggcaaagaagactcatctctttcccttttttcctaacactcggt
tttgcaaagatgaacgttggctgcgtcatcctggcgtgcaccttacttgtgggcgcatcc
tcggggagtaaggcagtccagcccctcaaacccccatgcagaccaggcttctcccagaac
ttctacacagtgattgtctcgagagacgtactgcacggccagagcattctcaaagatacc
accctgtccagtgaacgtgtgaagtttgaggattgccagcgcagcagagaggtgggcttt
gtcagtaacgaccccaacttcagcgtgaggcctgatgggacggtttatgctgagcaggat
ctggcaaacctgtcagagcccgtccagttcatggtgacggcacgggggcttcatgaccca
cacatctgggagaccaccgttaagctcgccctggctggacatcctcatcctttagccctg
acaaaggttgaagaaatgctgtcaagagtctgggactcccaacccagagttatcaggttt
cctcgaaaacatcagaggagctcctctgccaatgggctgaggcgacagaagagagactgg
gtcatcccacctatcaatgtgcctgaaaactcccgaggacccttccctcacatgcttgtc
agaatccgctcagatcaggacaaggacgtcggcatccgctacagcatcacaggagcaggc
gctgatcagcccccgaatgggatctacaacatagaccccatcagtggcaacatgtttgtc
acccaaccgctggacagagaggagagagcatccttccatctgcgagcccatgcagtagac
atgaatggtaaccaagtggagaatccaatcgatctgtacatctatgtgatcgacatgaac
gacaacagacctgagtttcagaaccaggtgtacaacggctctgtggctgaagggtccaaa
ccaggctcgtctgtgatgcaggtgacagccaccgactcagatgactccaccacagctaac
ggcatggtgcgctaccgcatcctctcacagacaccccacagccccatccccaacatgttc
accatcaacagcgagactggagacatagttacagtggcagccggcctggacagagagaaa
gtgtctcagtataccattattgtccaggccactgacatggagggaaacttgaattttggc
ttgtccaacacagccacagccctaatcagcattaccgacatcaatgacaatcccccagaa
ctgacagtcagaacgttttcaggggaggtgccagagaacaaggtgaatgtggtggtgacc
aacctgactgtggtagacagggatcagccccacagtcccaactggaacgccgtctaccgc
atcgtcagcggagacccctctggacacttcaccatccgcaccaaccccatcaccaatgag
ggcatgctgacagtggtcaagccggtggattttgagatgaatcgcgccttcatgctgacc
gtggtggtgtccaaccaggcccacctggctagcggcatccagtcctcgcttcagtccaca
gcgggagtcaccatttcagttcaggatgtgaacgagcctcccgtcttccctgtcaacccc
aagacaatccgctttgaggagggtgtgccagcagggaccactcttaccgtgttcgctgca
caggaccctgaccactttatccaccagattgtcaggtactccaagctgtcagacccagct
aactggctgaagatcaacaggaccaatggtcagatcaccaccatggccctgctggaccga
gagtccatgtacgtcagaaacaacgtgtacgaggccacattcctggcattcgacaatggt
aagtctggctcgcctcaggccagcgggacaggaaccctccagatctacctgatcgacgtg
aacgacaacgcgccagtgctgatacccagggaggcccaggtgtgcgaacgtgcccgcccc
aactccaggatcaacatcacagcctctgacgctgacgccgaccccaacgtagggcccttt
gtcttcgagctgccttcttttcctgccagcgttcgccgcaactggactatttccagactc
agcggtgactatgctcagctgaggctaaggattccttacctggaggcaggtgtgtacggg
atccccatcatcgtgtccgattcggggaaccctcctctgtccaaccgctctgtgatcaga
gtcaaagtttgtccctgtgacgataacggggactgcagcgccacaggggccgtggcagcc
gctggccttggcaccggggccatcatcgctatactcatctgcatcatcatactgctcagc
atggttctgctgttcgtggtgtggatgaagcgtagagagaaggagcggcaggcgaagccc
ctgctgatcgatcctgaggacgatgtcagagacaacatcctcaagtatgatgaggaggga
ggaggagaagaagaccaggactatgacctgagccagctgcagcagcccgagtctttagac
cacatcatcaataagccggctggggtgcgcagggtggacgagagacctgtgattgctgag
tcgcagtaccccgtcagacccagtctgccccaccctggagatattggagacttcattaat
gacggtctgagggcagcagacaacgaccccacagctcctccctacgactccctgctggtg
ttcgactacgagggcagcggttcaaccgccggctccgtcagctcgctcaactccaccagc
tcaggggaccaggactacgactacctcaacgactggggccctcgcttcaagaagctggcc
gacctctacggaggaggggatgatgactga
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