Siniperca chuatsi (mandarin fish): 122864008
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Entry
122864008 CDS
T08948
Symbol
snx13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
schu04990
]
122864008 (snx13)
Domain-containing proteins not elsewhere classified [BR:
schu04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
122864008 (snx13)
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Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
Motif
Other DBs
NCBI-GeneID:
122864008
NCBI-ProteinID:
XP_044026930
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Position
LG17:16785438..16811452
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AA seq
1008 aa
AA seq
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MHLAVRRMDSLVSALRSTGHRGARDFILLQPCLLCDPAGTLSTWRQASLSIWGWGGLGVV
LFLVTFGPFAIFYLAFYIFCFIGGGFAVTLLYGKINSEKHLEKCEHSYLPPTQIGILKTL
DEMKLEMKPIKIDRRLTGSSFIDEPLQQVIQFALRDYIQYWYYTLSEDESFLLEIRQTLQ
NALVQFSTRSKEVDWQPYFTTRLVDDFATHLRVFRKAQDRLTDREDKQRDITEELVDSFF
EAEVEMERKICRDVVCTSHKDEEGFLRDLCELLLYLLLPPGDFHNKNMRYFLREVLARGV
LLPLINQLSDPDYINQFVIWMIRDSSCNYEAFMNILKLTDKPAELEAVKDKVLEELQYLR
SLDTAGDDINVIKNQINSLLFVKKVCETRIQRLKSGKEVDALKLAANFGKLCVIPLDHIL
VHNIALQFFMDFMQAAGAQAELFFWLTVEGYRVTAQQQLEAMQVWQKDGKKQPSATKGLL
KAAALGVYEQYLSDKASPRVQVHEASITKLGEKLQKDDPTPEIFDEIQRNVYDMMLRDER
FYPSFKQSPLYVRMLAELDMLKEPSYRGSDDGDGESFNGSPTGSINLSLDDLSNSCHDES
MHLHAFISDTADACLPGFWGAAGVCNDHGKTYALYAITVFRRNQDGSEDCWKTYRRYSDF
HDFHMRITEQFENLASILKLPGKKTFNNMDRDFLEKRKKDLNAYLQLLLNPEMVKACPTL
IPYVYDFLENKAYSKGKGEFARKIDTFVNPLKSSMRNVSNAVKALPDSLAEGMTKVSDNM
GRMSERLGQDIKQSILKVPPLLPKSDTDPEHCRVSAQLDDNVDDNIPLRVMLLLMDEVFD
LKEKNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDYLTSPEQVADYVKKFRDSYWPNG
ILAETPPRRDKSIRMRTRVAAKTSLLGIMPDELKHIIGADTTRKGILRVFDMFQYQPMNR
RLVYVFLEGFLETMFPQYKFPELFVKLHSRSPRIHRYSQKLKSSSLKR
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgcacctggctgttagaagaatggacagcttggtgagtgcgctccgttctactggacat
agaggagccagagactttattttgcttcagccttgcctgctgtgtgacccagctgggact
ctgtctacctggagacaggccagtctgtccatctggggatgggggggtcttggagtcgtg
ctgttccttgtcacctttggaccctttgccatattctacctggccttttatatcttctgc
ttcattggagggggctttgcggtcactctgctctatggaaagatcaactcagagaaacac
ctggaaaagtgcgagcattcttacttgccacccacacaaattgggatactgaagacattg
gatgagatgaagctggagatgaaacctataaagattgacaggagactgactggctccagt
ttcatagatgaaccactacaacaggtgatccagtttgctctgagagactatatccagtac
tggtactacactctgagtgaggatgagtccttcttattggagatcagacagacgctgcag
aacgcccttgtccagttctctacacggtccaaagaggtggactggcagccttacttcact
actcgcctggtggacgactttgccactcatttacgtgtctttagaaaagcccaggatcgc
ctcaccgacagagaggacaagcaaagggacataacagaggagctggtggactccttcttt
gaggctgaggtggagatggaaaggaagatttgtcgagacgtagtttgcacttcacacaag
gatgaagaaggttttcttcgggacttgtgtgagttgctcctgtatctgttactacctcct
ggagatttccacaacaaaaacatgagatatttcctaagggaggtgctggcacgtggtgtg
ctacttcctctgatcaatcagctgagcgacccagactacatcaaccagtttgtcatctgg
atgatacgggactccagctgtaactatgaagccttcatgaacatcctgaagttgacagac
aagcctgctgagctggaggccgtcaaggacaaggtgctggaggagctgcagtacctccgc
tccctggacaccgctggagatgacataaatgtgatcaagaaccagattaacagtcttctg
tttgtgaagaaggtgtgtgagaccaggatccagagactaaagtctggcaaggaagtggat
gccttgaagctggcagccaactttggcaagctgtgtgttatcccactggatcatatcctc
gtccacaacatagccctgcagttcttcatggacttcatgcaggcagcgggggcccaggca
gagctgttcttctggctcactgtggagggctacagggtgactgcacagcagcagctggag
gccatgcaggtctggcagaaagatggcaagaagcagcccagcgctaccaaggggctgctg
aaggccgctgcactgggtgtatacgaacaatacctctctgacaaggcatctcccagggtg
caggtgcatgaggcatccataacaaaactaggggagaagttacagaaagacgaccccacg
ccagagatatttgatgaaatccagagaaatgtgtatgacatgatgctacgtgatgagcgc
ttctacccctccttcaaacagagtcctctctacgtccgcatgctagcagagctggacatg
ttgaaagagcccagctaccggggatctgatgatggcgatggagaatcctttaatggctct
cccacaggaagcataaacctatctttggacgacttgtccaactcctgccatgatgaatct
atgcacctacatgccttcatctccgacacagctgacgcttgtctccccggcttctggggt
gctgcaggggtttgcaatgaccacggtaagacctacgcgctgtatgccatcaccgtgttc
agacgcaaccaggacggcagtgaggactgctggaagacctatcgccgctactctgacttc
cacgacttccatatgaggatcactgaacagtttgagaacctggcatcgatcctcaagctg
ccagggaaaaagaccttcaacaacatggacagagacttcttggagaagagaaaaaaagac
ctcaatgcttacctgcagttgctgctgaacccagagatggtgaaggcctgtccaactctg
attccttatgtctatgacttcctagagaacaaggcctacagcaagggcaagggagagttt
gcacgcaagatagacacatttgtaaatcctctgaagagctccatgagaaacgtgtccaac
gcagtgaaggccctgccagacagtctggctgagggcatgaccaaggtctctgataacatg
ggccgcatgtcagaaagactgggccaggacattaaacagtccatactcaaggtgcctcca
ctcctcccaaagtctgacaccgaccctgaacactgtcgagtctctgctcagcttgatgac
aacgtggatgataacatcccactgagggtaatgctgttgctgatggacgaagtgtttgac
ctcaaggagaaaaaccagtggctgcgcaggaacattaagaacctgctgcagcagctcatc
agggccacatatggagacaccatcaacaggaaaattgtggatcatgtggactacttgacc
tcaccagagcaggttgcagattatgtcaagaagttcagggattcctactggcccaacggt
attctggctgagacgccgcctcgtcgggacaagagtatccgcatgaggacacgagtagcc
gccaagaccagcctgctgggcatcatgccagatgagctgaagcacatcatcggagcggac
accacgaggaagggcatactccgcgtcttcgacatgtttcagtaccaacccatgaaccgt
cggctggtctacgttttcctggagggcttcttggagacgatgttcccccagtacaaattc
cctgagctctttgtcaagctacactcccgctcgccacgcatccacagatatagccagaaa
ctcaaatcttcatccctcaaaaggtga
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