Siniperca chuatsi (mandarin fish): 122864023
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Entry
122864023 CDS
T08948
Symbol
vps50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
schu
Siniperca chuatsi (mandarin fish)
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
schu04131
]
122864023 (vps50)
Membrane trafficking [BR:
schu04131
]
Protein recycling
Others
EARP complex
122864023 (vps50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Kgd4-YMR31
Motif
Other DBs
NCBI-GeneID:
122864023
NCBI-ProteinID:
XP_044026952
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All DBs
Position
LG17:16934208..17039985
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AA seq
993 aa
AA seq
DB search
MQKIKSLMARQGLRSPQESMADLSPVENLRIPSKEELRELREQPIDPQAEQEIIESIEEV
YFSNDSFDMVQHELEKLPPDLNLKELEEYRDKLKRQQAAVSKKVADLILEKQPAYVKELE
RVTALQTNLQLAAVICTNARRQLSVAKEGFTGASLGLLANQRRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKTCKHFDVSHYTKVQLAYTLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYKDLCTHITLDSYIPCLTDLCKALWEVMLSYHRTMQWHEEHDKQETTPTPDD
AVAAESDESVVDRSYVKKKLEHGLTRIWQDVQLKVKAYILGTDMSNFKYDDFIVVLDVIS
RLMQVGEEFCGSKSEVLQESIKRQSINYFKNYHRARLEELRMFLENETWELCPVKSNFNI
AQLHEFKFMGQCRSPSVSPSRQAVSSTSPAQVEVSLFQQYLQEGNPFEMHAEHKEEETED
VLASNGYESDELEKSVYQDYDSDSDVPEELKQDYVDEQTGDAPHKSVSRETIRSKKKSDY
NLNKTNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHCVSQLFDYYLYAVYTFFGRN
DMPVPSPSLPTHGGREAGTARVVGPACLYESSGLGLISSRLRTTLNRIQENLIDMEAVGE
NAGAHGPAEDRKEKVPSPHLSQLVVLTNSGTLYGLAQRVVATESLVFLAEQFESLQSHLD
TMMPAAKKPFLQQFYSQTVSTASELRKPIYWIVAAKAIDYEQMLLLMAGVKWDIREIMSQ
HNVYVDVLLKEFEQFNKRLGDVSRHVRIPLPVSNVLWEHCIRLANRTLVEGYANVKKCSN
EGRALMQLDFQQFLMKLEKLTDLRPIPDKEFVETYIKAYYLTENDMEQFIKNHREYSMKQ
LANLVNVCLGSHINKKARQKLLAAIDDIDRPKR
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagatcaagtctcttatggcccggcagggcctgagaagcccccaagaaagcatg
gcagacctcagtcctgtggagaacctgaggatcccgagcaaggaggagttgcgggagctg
agggagcagcccattgacccccaggctgagcaggagatcattgagagtatcgaggaggtc
tatttctctaacgactccttcgacatggtgcagcacgaactggagaaactcccacctgac
ctgaacctgaaggagctggaagagtacagagacaagctgaagagacaacaggcagcagtt
tctaaaaaggttgccgatctcattctggagaaacagcctgcttatgtcaaggaactggag
cgtgtgacggcattacagactaaccttcagctggcagcagtcatttgcactaatgcaagg
aggcaattgagcgttgcgaaggaaggattcacaggagccagcctgggtctactggccaat
cagaggagacgacaactgctgacaggcctacttaagtcactgaggaccatcaagacgctg
caaagaacagatgtaagactcagcgagatgcttgaggaggaagactatccaggtgcaatc
cagctctgtctggaatgtcaaaaggctgccagcaccttcaaacactacagctgcatcagt
gaactgaattccaaactacaagacactctggagcaaatagaggagcagcttgatgtcgcc
ctctcgaagacttgtaagcactttgatgtttcgcactacaccaaggtccagctggcctac
acactcctgggcaagacacagactgctatggaccagctgcacatgcacttcacccaggcc
atccacaacacagtgttccaagtggtgctcggatatgtggagctgtgtgccggcaatgct
gataccaagttccagaagatgcagtacaaggacctgtgcacgcatatcaccctggacagc
tacattccctgcctgacagatctatgcaaggcattgtgggaggtgatgctgagctaccac
cgcaccatgcagtggcatgaggagcatgacaaacaggagaccacacccactccagatgac
gcagtagcagcagagtctgatgagtcggtggtggaccgcagctatgtaaagaagaagctg
gagcatggactgacacggatctggcaggatgtccagttgaaagtgaaggcctacatcctg
gggacagacatgtctaacttcaaatatgacgatttcatagtggtactggatgtcatcagc
aggttgatgcaggtgggggaggagttctgtggcagtaagtcagaggtcctgcaggagtcc
atcaaacgccagagtatcaactactttaaaaactatcacagggcacgactggaagagctg
aggatgtttctggaaaatgagacgtgggaactgtgtccggtcaagtctaactttaacatc
gcccagctccatgagtttaagttcatgggccagtgtcgttctccatccgtttccccaagc
agacaggccgtgtcctcgaccagcccggctcaggtggaggtgtctctgttccagcagtac
cttcaggaggggaacccctttgagatgcatgctgagcacaaagaagaggagaccgaggat
gtgttggcatctaatgggtacgagtcagatgagctggagaagagtgtgtatcaagattac
gacagcgacagtgatgtccctgaggagctcaagcaggactacgtagacgagcagacgggc
gatgccccccacaagagtgtgtccagagagaccataagaagcaagaaaaagtcagactac
aacctaaataagaccaatgcaccgatcctcaccaacaccaccctgaatgtcatccggctt
gtcgggaagtatatgcagatgatgaacattctgaagccgatcgccttcgatgtcatccac
tgtgtgtcacagctcttcgactactacctgtacgctgtatacactttctttggacgcaat
gacatgcctgtcccaagcccgtctttgccaactcatggtggcagagaggcgggcactgcc
agggtggtgggccctgcttgcttgtatgagtcatcgggtctgggccttatcagcagcagg
ctgagaaccacactgaaccggatccaggagaacctcattgacatggaggcggtgggggag
aatgcaggagcccacggtccagcagaggacaggaaggagaaggtgcccagcccccatctc
agccaactggtggtcctcactaacagtgggactctttatggactagcacagagggtggtg
gccaccgagtctcttgtgtttctggccgaacaatttgaatccctccagtcccacctggac
acaatgatgcctgcagccaagaagcccttcctgcaacagttttattcccagacggtgtct
acagccagtgaacttcgaaaaccaatatactggattgttgcagccaaggccatcgactat
gaacaaatgttgctcttgatggccggagttaaatgggacattagggagataatgtcacag
cataatgtatatgtggacgtcctgttaaaggagtttgagcaatttaacaagcggctgggt
gatgtttccagacatgtgcgcatcccactgcctgtgtccaacgtcctctgggagcactgc
atccgcctggccaacaggactcttgtagaaggctatgctaatgtgaagaaatgcagcaat
gagggccgggccctgatgcagctggacttccaacagttcctcatgaagctggagaagctg
accgacctgcgacccattcctgataaggagtttgttgagacctacatcaaggcctattac
ctgacggagaatgacatggagcagtttatcaagaatcacagggagtactccatgaagcag
ctggccaacttggtgaacgtttgtctgggctcacatataaacaagaaggctcgtcagaaa
cttctggcggccatcgatgacattgacagacccaagagatag
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